Gene : Medtr1g050492 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11203:SF5 - CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 Description:  cleavage and polyadenylation specificity factor subunit 2
Genomic Order:  2523 Name:  ? Medtr1g050492
Secondary Identifier:  ? PAC:31096543
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g050492 0.5kb upstream 0.5kb upstream 9363 true chr1: 19477535-19486897 Medicago truncatula
Medtr1g050492 0.5kb upstream 0.5kb upstream 500 false chr1: 19477535-19478034 Medicago truncatula
Medtr1g050492 0.5kb downstream 0.5kb downstream 9363 true chr1: 19478035-19487397 Medicago truncatula
Medtr1g050492 0.5kb downstream 0.5kb downstream 500 false chr1: 19486898-19487397 Medicago truncatula
Medtr1g050492 1.0kb upstream 1.0kb upstream 9863 true chr1: 19477035-19486897 Medicago truncatula
Medtr1g050492 1.0kb upstream 1.0kb upstream 1000 false chr1: 19477035-19478034 Medicago truncatula
Medtr1g050492 1.0kb downstream 1.0kb downstream 9863 true chr1: 19478035-19487897 Medicago truncatula
Medtr1g050492 1.0kb downstream 1.0kb downstream 1000 false chr1: 19486898-19487897 Medicago truncatula
Medtr1g050492 2.0kb upstream 2.0kb upstream 10863 true chr1: 19476035-19486897 Medicago truncatula
Medtr1g050492 2.0kb upstream 2.0kb upstream 2000 false chr1: 19476035-19478034 Medicago truncatula
Medtr1g050492 2.0kb downstream 2.0kb downstream 10863 true chr1: 19478035-19488897 Medicago truncatula
Medtr1g050492 2.0kb downstream 2.0kb downstream 2000 false chr1: 19486898-19488897 Medicago truncatula
Medtr1g050492 5.0kb upstream 5.0kb upstream 13863 true chr1: 19473035-19486897 Medicago truncatula
Medtr1g050492 5.0kb upstream 5.0kb upstream 5000 false chr1: 19473035-19478034 Medicago truncatula
Medtr1g050492 5.0kb downstream 5.0kb downstream 13863 true chr1: 19478035-19491897 Medicago truncatula
Medtr1g050492 5.0kb downstream 5.0kb downstream 5000 false chr1: 19486898-19491897 Medicago truncatula
Medtr1g050492 10.0kb upstream 10.0kb upstream 18863 true chr1: 19468035-19486897 Medicago truncatula
Medtr1g050492 10.0kb upstream 10.0kb upstream 10000 false chr1: 19468035-19478034 Medicago truncatula
Medtr1g050492 10.0kb downstream 10.0kb downstream 18863 true chr1: 19478035-19496897 Medicago truncatula
Medtr1g050492 10.0kb downstream 10.0kb downstream 10000 false chr1: 19486898-19496897 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307431 5265 Fabidae View MSA
124064457 5270 Rosid View MSA
123738421 5271 Pentapetalae View MSA
122791055 5272 Eudicot View MSA
122046415 5273 Angiosperm View MSA
121346167 5274 Embryophyte View MSA
123425250 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.851       High
cufflinks 1.788        
cufflinks 2.032        
cufflinks 1.092       Low
cufflinks 2.793       High
cufflinks 1.13       Low
cufflinks 1.863        
cufflinks 1.75        
cufflinks 1.66        

0 Strain