Gene : Medtr1g054525 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR21495:SF59 - DIRIGENT PROTEIN 20-RELATED Description:  disease resistance response protein
Genomic Order:  2887 Name:  ? Medtr1g054525
Secondary Identifier:  ? PAC:31095061
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g054525 0.5kb upstream 0.5kb upstream 1468 true chr1: 23595914-23597381 Medicago truncatula
Medtr1g054525 0.5kb upstream 0.5kb upstream 500 false chr1: 23596882-23597381 Medicago truncatula
Medtr1g054525 0.5kb downstream 0.5kb downstream 1468 true chr1: 23595414-23596881 Medicago truncatula
Medtr1g054525 0.5kb downstream 0.5kb downstream 500 false chr1: 23595414-23595913 Medicago truncatula
Medtr1g054525 1.0kb upstream 1.0kb upstream 1968 true chr1: 23595914-23597881 Medicago truncatula
Medtr1g054525 1.0kb upstream 1.0kb upstream 1000 false chr1: 23596882-23597881 Medicago truncatula
Medtr1g054525 1.0kb downstream 1.0kb downstream 1968 true chr1: 23594914-23596881 Medicago truncatula
Medtr1g054525 1.0kb downstream 1.0kb downstream 1000 false chr1: 23594914-23595913 Medicago truncatula
Medtr1g054525 2.0kb upstream 2.0kb upstream 2968 true chr1: 23595914-23598881 Medicago truncatula
Medtr1g054525 2.0kb upstream 2.0kb upstream 2000 false chr1: 23596882-23598881 Medicago truncatula
Medtr1g054525 2.0kb downstream 2.0kb downstream 2968 true chr1: 23593914-23596881 Medicago truncatula
Medtr1g054525 2.0kb downstream 2.0kb downstream 2000 false chr1: 23593914-23595913 Medicago truncatula
Medtr1g054525 5.0kb upstream 5.0kb upstream 5968 true chr1: 23595914-23601881 Medicago truncatula
Medtr1g054525 5.0kb upstream 5.0kb upstream 5000 false chr1: 23596882-23601881 Medicago truncatula
Medtr1g054525 5.0kb downstream 5.0kb downstream 5968 true chr1: 23590914-23596881 Medicago truncatula
Medtr1g054525 5.0kb downstream 5.0kb downstream 5000 false chr1: 23590914-23595913 Medicago truncatula
Medtr1g054525 10.0kb upstream 10.0kb upstream 10968 true chr1: 23595914-23606881 Medicago truncatula
Medtr1g054525 10.0kb upstream 10.0kb upstream 10000 false chr1: 23596882-23606881 Medicago truncatula
Medtr1g054525 10.0kb downstream 10.0kb downstream 10968 true chr1: 23585914-23596881 Medicago truncatula
Medtr1g054525 10.0kb downstream 10.0kb downstream 10000 false chr1: 23585914-23595913 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311672 5265 Fabidae View MSA
124074832 5270 Rosid View MSA
123751910 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.99       Low
cufflinks 11.998     High High
cufflinks 8.254        
cufflinks 2.814        
cufflinks 12.347     High High
cufflinks 1.011       Low
cufflinks 0.612       Low
cufflinks 7.419        
cufflinks 2.746        

0 Strain