Gene : Medtr1g053975 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  2844 Name:  ? Medtr1g053975
Secondary Identifier:  ? PAC:31100706
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g053975 0.5kb upstream 0.5kb upstream 861 true chr1: 22955358-22956218 Medicago truncatula
Medtr1g053975 0.5kb upstream 0.5kb upstream 500 false chr1: 22955719-22956218 Medicago truncatula
Medtr1g053975 0.5kb downstream 0.5kb downstream 861 true chr1: 22954858-22955718 Medicago truncatula
Medtr1g053975 0.5kb downstream 0.5kb downstream 500 false chr1: 22954858-22955357 Medicago truncatula
Medtr1g053975 1.0kb upstream 1.0kb upstream 1361 true chr1: 22955358-22956718 Medicago truncatula
Medtr1g053975 1.0kb upstream 1.0kb upstream 1000 false chr1: 22955719-22956718 Medicago truncatula
Medtr1g053975 1.0kb downstream 1.0kb downstream 1361 true chr1: 22954358-22955718 Medicago truncatula
Medtr1g053975 1.0kb downstream 1.0kb downstream 1000 false chr1: 22954358-22955357 Medicago truncatula
Medtr1g053975 2.0kb upstream 2.0kb upstream 2361 true chr1: 22955358-22957718 Medicago truncatula
Medtr1g053975 2.0kb upstream 2.0kb upstream 2000 false chr1: 22955719-22957718 Medicago truncatula
Medtr1g053975 2.0kb downstream 2.0kb downstream 2361 true chr1: 22953358-22955718 Medicago truncatula
Medtr1g053975 2.0kb downstream 2.0kb downstream 2000 false chr1: 22953358-22955357 Medicago truncatula
Medtr1g053975 5.0kb upstream 5.0kb upstream 5361 true chr1: 22955358-22960718 Medicago truncatula
Medtr1g053975 5.0kb upstream 5.0kb upstream 5000 false chr1: 22955719-22960718 Medicago truncatula
Medtr1g053975 5.0kb downstream 5.0kb downstream 5361 true chr1: 22950358-22955718 Medicago truncatula
Medtr1g053975 5.0kb downstream 5.0kb downstream 5000 false chr1: 22950358-22955357 Medicago truncatula
Medtr1g053975 10.0kb upstream 10.0kb upstream 10361 true chr1: 22955358-22965718 Medicago truncatula
Medtr1g053975 10.0kb upstream 10.0kb upstream 10000 false chr1: 22955719-22965718 Medicago truncatula
Medtr1g053975 10.0kb downstream 10.0kb downstream 10361 true chr1: 22945358-22955718 Medicago truncatula
Medtr1g053975 10.0kb downstream 10.0kb downstream 10000 false chr1: 22945358-22955357 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632618 5273 Angiosperm View MSA
122271349 5265 Fabidae View MSA
124011981 5270 Rosid View MSA
123585874 5271 Pentapetalae View MSA
122620571 5272 Eudicot View MSA
120904722 5274 Embryophyte View MSA
122945371 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.356        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain