Gene : Medtr1g038530 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11080:SF13 - NICOTINAMIDASE 3 Description:  isochorismatase hydrolase family protein
Genomic Order:  1857 Name:  ? Medtr1g038530
Secondary Identifier:  ? PAC:31094205
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g038530 0.5kb upstream 0.5kb upstream 1816 true chr1: 14081233-14083048 Medicago truncatula
Medtr1g038530 0.5kb upstream 0.5kb upstream 500 false chr1: 14082549-14083048 Medicago truncatula
Medtr1g038530 0.5kb downstream 0.5kb downstream 1816 true chr1: 14080733-14082548 Medicago truncatula
Medtr1g038530 0.5kb downstream 0.5kb downstream 500 false chr1: 14080733-14081232 Medicago truncatula
Medtr1g038530 1.0kb upstream 1.0kb upstream 2316 true chr1: 14081233-14083548 Medicago truncatula
Medtr1g038530 1.0kb upstream 1.0kb upstream 1000 false chr1: 14082549-14083548 Medicago truncatula
Medtr1g038530 1.0kb downstream 1.0kb downstream 2316 true chr1: 14080233-14082548 Medicago truncatula
Medtr1g038530 1.0kb downstream 1.0kb downstream 1000 false chr1: 14080233-14081232 Medicago truncatula
Medtr1g038530 2.0kb upstream 2.0kb upstream 3316 true chr1: 14081233-14084548 Medicago truncatula
Medtr1g038530 2.0kb upstream 2.0kb upstream 2000 false chr1: 14082549-14084548 Medicago truncatula
Medtr1g038530 2.0kb downstream 2.0kb downstream 3316 true chr1: 14079233-14082548 Medicago truncatula
Medtr1g038530 2.0kb downstream 2.0kb downstream 2000 false chr1: 14079233-14081232 Medicago truncatula
Medtr1g038530 5.0kb upstream 5.0kb upstream 6316 true chr1: 14081233-14087548 Medicago truncatula
Medtr1g038530 5.0kb upstream 5.0kb upstream 5000 false chr1: 14082549-14087548 Medicago truncatula
Medtr1g038530 5.0kb downstream 5.0kb downstream 6316 true chr1: 14076233-14082548 Medicago truncatula
Medtr1g038530 5.0kb downstream 5.0kb downstream 5000 false chr1: 14076233-14081232 Medicago truncatula
Medtr1g038530 10.0kb upstream 10.0kb upstream 11316 true chr1: 14081233-14092548 Medicago truncatula
Medtr1g038530 10.0kb upstream 10.0kb upstream 10000 false chr1: 14082549-14092548 Medicago truncatula
Medtr1g038530 10.0kb downstream 10.0kb downstream 11316 true chr1: 14071233-14082548 Medicago truncatula
Medtr1g038530 10.0kb downstream 10.0kb downstream 10000 false chr1: 14071233-14081232 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308058 5265 Fabidae View MSA
124061272 5270 Rosid View MSA
123742899 5271 Pentapetalae View MSA
122791085 5272 Eudicot View MSA
122047697 5273 Angiosperm View MSA
121347949 5274 Embryophyte View MSA
123427171 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain