Gene : Medtr1g042910 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  2124 Name:  ? Medtr1g042910
Secondary Identifier:  ? PAC:31096200
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g042910 0.5kb upstream 0.5kb upstream 1270 true chr1: 16071196-16072465 Medicago truncatula
Medtr1g042910 0.5kb upstream 0.5kb upstream 500 false chr1: 16071966-16072465 Medicago truncatula
Medtr1g042910 0.5kb downstream 0.5kb downstream 1270 true chr1: 16070696-16071965 Medicago truncatula
Medtr1g042910 0.5kb downstream 0.5kb downstream 500 false chr1: 16070696-16071195 Medicago truncatula
Medtr1g042910 1.0kb upstream 1.0kb upstream 1770 true chr1: 16071196-16072965 Medicago truncatula
Medtr1g042910 1.0kb upstream 1.0kb upstream 1000 false chr1: 16071966-16072965 Medicago truncatula
Medtr1g042910 1.0kb downstream 1.0kb downstream 1770 true chr1: 16070196-16071965 Medicago truncatula
Medtr1g042910 1.0kb downstream 1.0kb downstream 1000 false chr1: 16070196-16071195 Medicago truncatula
Medtr1g042910 2.0kb upstream 2.0kb upstream 2770 true chr1: 16071196-16073965 Medicago truncatula
Medtr1g042910 2.0kb upstream 2.0kb upstream 2000 false chr1: 16071966-16073965 Medicago truncatula
Medtr1g042910 2.0kb downstream 2.0kb downstream 2770 true chr1: 16069196-16071965 Medicago truncatula
Medtr1g042910 2.0kb downstream 2.0kb downstream 2000 false chr1: 16069196-16071195 Medicago truncatula
Medtr1g042910 5.0kb upstream 5.0kb upstream 5770 true chr1: 16071196-16076965 Medicago truncatula
Medtr1g042910 5.0kb upstream 5.0kb upstream 5000 false chr1: 16071966-16076965 Medicago truncatula
Medtr1g042910 5.0kb downstream 5.0kb downstream 5770 true chr1: 16066196-16071965 Medicago truncatula
Medtr1g042910 5.0kb downstream 5.0kb downstream 5000 false chr1: 16066196-16071195 Medicago truncatula
Medtr1g042910 10.0kb upstream 10.0kb upstream 10770 true chr1: 16071196-16081965 Medicago truncatula
Medtr1g042910 10.0kb upstream 10.0kb upstream 10000 false chr1: 16071966-16081965 Medicago truncatula
Medtr1g042910 10.0kb downstream 10.0kb downstream 10770 true chr1: 16061196-16071965 Medicago truncatula
Medtr1g042910 10.0kb downstream 10.0kb downstream 10000 false chr1: 16061196-16071195 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632795 5273 Angiosperm View MSA
122271565 5265 Fabidae View MSA
124012169 5270 Rosid View MSA
123586051 5271 Pentapetalae View MSA
122620748 5272 Eudicot View MSA
120904899 5274 Embryophyte View MSA
122945548 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 781.264     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117        

0 Strain