Gene : Medtr1g043080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10641//PTHR10641:SF650 - MYB-LIKE DNA-BINDING PROTEIN MYB Description:  myb-related transcription factor LBM1
Genomic Order:  2131 Name:  ? Medtr1g043080
Secondary Identifier:  ? PAC:31095627
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g043080 0.5kb upstream 0.5kb upstream 2634 true chr1: 16137369-16140002 Medicago truncatula
Medtr1g043080 0.5kb upstream 0.5kb upstream 500 false chr1: 16139503-16140002 Medicago truncatula
Medtr1g043080 0.5kb downstream 0.5kb downstream 2634 true chr1: 16136869-16139502 Medicago truncatula
Medtr1g043080 0.5kb downstream 0.5kb downstream 500 false chr1: 16136869-16137368 Medicago truncatula
Medtr1g043080 1.0kb upstream 1.0kb upstream 3134 true chr1: 16137369-16140502 Medicago truncatula
Medtr1g043080 1.0kb upstream 1.0kb upstream 1000 false chr1: 16139503-16140502 Medicago truncatula
Medtr1g043080 1.0kb downstream 1.0kb downstream 3134 true chr1: 16136369-16139502 Medicago truncatula
Medtr1g043080 1.0kb downstream 1.0kb downstream 1000 false chr1: 16136369-16137368 Medicago truncatula
Medtr1g043080 2.0kb upstream 2.0kb upstream 4134 true chr1: 16137369-16141502 Medicago truncatula
Medtr1g043080 2.0kb upstream 2.0kb upstream 2000 false chr1: 16139503-16141502 Medicago truncatula
Medtr1g043080 2.0kb downstream 2.0kb downstream 4134 true chr1: 16135369-16139502 Medicago truncatula
Medtr1g043080 2.0kb downstream 2.0kb downstream 2000 false chr1: 16135369-16137368 Medicago truncatula
Medtr1g043080 5.0kb upstream 5.0kb upstream 7134 true chr1: 16137369-16144502 Medicago truncatula
Medtr1g043080 5.0kb upstream 5.0kb upstream 5000 false chr1: 16139503-16144502 Medicago truncatula
Medtr1g043080 5.0kb downstream 5.0kb downstream 7134 true chr1: 16132369-16139502 Medicago truncatula
Medtr1g043080 5.0kb downstream 5.0kb downstream 5000 false chr1: 16132369-16137368 Medicago truncatula
Medtr1g043080 10.0kb upstream 10.0kb upstream 12134 true chr1: 16137369-16149502 Medicago truncatula
Medtr1g043080 10.0kb upstream 10.0kb upstream 10000 false chr1: 16139503-16149502 Medicago truncatula
Medtr1g043080 10.0kb downstream 10.0kb downstream 12134 true chr1: 16127369-16139502 Medicago truncatula
Medtr1g043080 10.0kb downstream 10.0kb downstream 10000 false chr1: 16127369-16137368 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310601 5265 Fabidae View MSA
124069462 5270 Rosid View MSA
123753515 5271 Pentapetalae View MSA
122794930 5272 Eudicot View MSA
122045941 5273 Angiosperm View MSA
121350389 5274 Embryophyte View MSA
123381710 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.701     High  
cufflinks 25.35     High  
cufflinks 31.777     High  
cufflinks 12.408     High Low
cufflinks 40.853     High High
cufflinks 22.656     High  
cufflinks 33.184     High  
cufflinks 36.694     High  
cufflinks 13.16     High Low

0 Strain