Gene : Medtr1g043040 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23382//PTHR23382:SF7 - MALATE DEHYDROGENASE Description:  cytoplasmic-like malate dehydrogenase
Genomic Order:  2128 Name:  ? Medtr1g043040
Secondary Identifier:  ? PAC:31093176
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7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLUCONEO-PWY Medicago truncatula pathologic  
Mtruncatula GLYOXYLATE-BYPASS Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PWY-561 Medicago truncatula pathologic  
Mtruncatula PWY-5690 Medicago truncatula pathologic  
Mtruncatula PWY66-399 Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g043040 0.5kb upstream 0.5kb upstream 5735 true chr1: 16117304-16123038 Medicago truncatula
Medtr1g043040 0.5kb upstream 0.5kb upstream 500 false chr1: 16122539-16123038 Medicago truncatula
Medtr1g043040 0.5kb downstream 0.5kb downstream 5735 true chr1: 16116804-16122538 Medicago truncatula
Medtr1g043040 0.5kb downstream 0.5kb downstream 500 false chr1: 16116804-16117303 Medicago truncatula
Medtr1g043040 1.0kb upstream 1.0kb upstream 6235 true chr1: 16117304-16123538 Medicago truncatula
Medtr1g043040 1.0kb upstream 1.0kb upstream 1000 false chr1: 16122539-16123538 Medicago truncatula
Medtr1g043040 1.0kb downstream 1.0kb downstream 6235 true chr1: 16116304-16122538 Medicago truncatula
Medtr1g043040 1.0kb downstream 1.0kb downstream 1000 false chr1: 16116304-16117303 Medicago truncatula
Medtr1g043040 2.0kb upstream 2.0kb upstream 7235 true chr1: 16117304-16124538 Medicago truncatula
Medtr1g043040 2.0kb upstream 2.0kb upstream 2000 false chr1: 16122539-16124538 Medicago truncatula
Medtr1g043040 2.0kb downstream 2.0kb downstream 7235 true chr1: 16115304-16122538 Medicago truncatula
Medtr1g043040 2.0kb downstream 2.0kb downstream 2000 false chr1: 16115304-16117303 Medicago truncatula
Medtr1g043040 5.0kb upstream 5.0kb upstream 10235 true chr1: 16117304-16127538 Medicago truncatula
Medtr1g043040 5.0kb upstream 5.0kb upstream 5000 false chr1: 16122539-16127538 Medicago truncatula
Medtr1g043040 5.0kb downstream 5.0kb downstream 10235 true chr1: 16112304-16122538 Medicago truncatula
Medtr1g043040 5.0kb downstream 5.0kb downstream 5000 false chr1: 16112304-16117303 Medicago truncatula
Medtr1g043040 10.0kb upstream 10.0kb upstream 15235 true chr1: 16117304-16132538 Medicago truncatula
Medtr1g043040 10.0kb upstream 10.0kb upstream 10000 false chr1: 16122539-16132538 Medicago truncatula
Medtr1g043040 10.0kb downstream 10.0kb downstream 15235 true chr1: 16107304-16122538 Medicago truncatula
Medtr1g043040 10.0kb downstream 10.0kb downstream 10000 false chr1: 16107304-16117303 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303354 5265 Fabidae View MSA
124064013 5270 Rosid View MSA
123739138 5271 Pentapetalae View MSA
122789281 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.161     High  
cufflinks 27.64     High  
cufflinks 18.745     High  
cufflinks 34.312     High  
cufflinks 28.434     High  
cufflinks 12.574     High Low
cufflinks 29.83     High  
cufflinks 21.643     High  
cufflinks 54.636     High High

0 Strain