Gene : Medtr1g045140 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR35709:SF1 - PROTEIN PROTON GRADIENT REGULATION 5, CHLOROPLASTIC Description:  proton gradient regulation protein
Genomic Order:  2211 Name:  ? Medtr1g045140
Secondary Identifier:  ? PAC:31097074
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g045140 0.5kb upstream 0.5kb upstream 2032 true chr1: 16946691-16948722 Medicago truncatula
Medtr1g045140 0.5kb upstream 0.5kb upstream 500 false chr1: 16948223-16948722 Medicago truncatula
Medtr1g045140 0.5kb downstream 0.5kb downstream 2032 true chr1: 16946191-16948222 Medicago truncatula
Medtr1g045140 0.5kb downstream 0.5kb downstream 500 false chr1: 16946191-16946690 Medicago truncatula
Medtr1g045140 1.0kb upstream 1.0kb upstream 2532 true chr1: 16946691-16949222 Medicago truncatula
Medtr1g045140 1.0kb upstream 1.0kb upstream 1000 false chr1: 16948223-16949222 Medicago truncatula
Medtr1g045140 1.0kb downstream 1.0kb downstream 2532 true chr1: 16945691-16948222 Medicago truncatula
Medtr1g045140 1.0kb downstream 1.0kb downstream 1000 false chr1: 16945691-16946690 Medicago truncatula
Medtr1g045140 2.0kb upstream 2.0kb upstream 3532 true chr1: 16946691-16950222 Medicago truncatula
Medtr1g045140 2.0kb upstream 2.0kb upstream 2000 false chr1: 16948223-16950222 Medicago truncatula
Medtr1g045140 2.0kb downstream 2.0kb downstream 3532 true chr1: 16944691-16948222 Medicago truncatula
Medtr1g045140 2.0kb downstream 2.0kb downstream 2000 false chr1: 16944691-16946690 Medicago truncatula
Medtr1g045140 5.0kb upstream 5.0kb upstream 6532 true chr1: 16946691-16953222 Medicago truncatula
Medtr1g045140 5.0kb upstream 5.0kb upstream 5000 false chr1: 16948223-16953222 Medicago truncatula
Medtr1g045140 5.0kb downstream 5.0kb downstream 6532 true chr1: 16941691-16948222 Medicago truncatula
Medtr1g045140 5.0kb downstream 5.0kb downstream 5000 false chr1: 16941691-16946690 Medicago truncatula
Medtr1g045140 10.0kb upstream 10.0kb upstream 11532 true chr1: 16946691-16958222 Medicago truncatula
Medtr1g045140 10.0kb upstream 10.0kb upstream 10000 false chr1: 16948223-16958222 Medicago truncatula
Medtr1g045140 10.0kb downstream 10.0kb downstream 11532 true chr1: 16936691-16948222 Medicago truncatula
Medtr1g045140 10.0kb downstream 10.0kb downstream 10000 false chr1: 16936691-16946690 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313329 5265 Fabidae View MSA
124063671 5270 Rosid View MSA
123746735 5271 Pentapetalae View MSA
122772016 5272 Eudicot View MSA
122041936 5273 Angiosperm View MSA
121350110 5274 Embryophyte View MSA
123425373 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.136       Low
cufflinks 151.931     High High
cufflinks 64.716     High  
cufflinks 2.188        
cufflinks 85.247     High  
cufflinks 0.072     Low Low
cufflinks 0.691        
cufflinks 114.329     High High
cufflinks 0.221        

0 Strain