Gene : Medtr1g044450 M. truncatula Mt4.0v1
Defline:  (1 of 16) PF00917 - MATH domain (MATH) Description:  meprin and TRAF (MATH)-like domain protein
Genomic Order:  2184 Name:  ? Medtr1g044450
Secondary Identifier:  ? PAC:31092614
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g044450 0.5kb upstream 0.5kb upstream 12807 true chr1: 16770015-16782821 Medicago truncatula
Medtr1g044450 0.5kb upstream 0.5kb upstream 500 false chr1: 16770015-16770514 Medicago truncatula
Medtr1g044450 0.5kb downstream 0.5kb downstream 12807 true chr1: 16770515-16783321 Medicago truncatula
Medtr1g044450 0.5kb downstream 0.5kb downstream 500 false chr1: 16782822-16783321 Medicago truncatula
Medtr1g044450 1.0kb upstream 1.0kb upstream 13307 true chr1: 16769515-16782821 Medicago truncatula
Medtr1g044450 1.0kb upstream 1.0kb upstream 1000 false chr1: 16769515-16770514 Medicago truncatula
Medtr1g044450 1.0kb downstream 1.0kb downstream 13307 true chr1: 16770515-16783821 Medicago truncatula
Medtr1g044450 1.0kb downstream 1.0kb downstream 1000 false chr1: 16782822-16783821 Medicago truncatula
Medtr1g044450 2.0kb upstream 2.0kb upstream 14307 true chr1: 16768515-16782821 Medicago truncatula
Medtr1g044450 2.0kb upstream 2.0kb upstream 2000 false chr1: 16768515-16770514 Medicago truncatula
Medtr1g044450 2.0kb downstream 2.0kb downstream 14307 true chr1: 16770515-16784821 Medicago truncatula
Medtr1g044450 2.0kb downstream 2.0kb downstream 2000 false chr1: 16782822-16784821 Medicago truncatula
Medtr1g044450 5.0kb upstream 5.0kb upstream 17307 true chr1: 16765515-16782821 Medicago truncatula
Medtr1g044450 5.0kb upstream 5.0kb upstream 5000 false chr1: 16765515-16770514 Medicago truncatula
Medtr1g044450 5.0kb downstream 5.0kb downstream 17307 true chr1: 16770515-16787821 Medicago truncatula
Medtr1g044450 5.0kb downstream 5.0kb downstream 5000 false chr1: 16782822-16787821 Medicago truncatula
Medtr1g044450 10.0kb upstream 10.0kb upstream 22307 true chr1: 16760515-16782821 Medicago truncatula
Medtr1g044450 10.0kb upstream 10.0kb upstream 10000 false chr1: 16760515-16770514 Medicago truncatula
Medtr1g044450 10.0kb downstream 10.0kb downstream 22307 true chr1: 16770515-16792821 Medicago truncatula
Medtr1g044450 10.0kb downstream 10.0kb downstream 10000 false chr1: 16782822-16792821 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312741 5265 Fabidae View MSA
124063906 5270 Rosid View MSA
123740151 5271 Pentapetalae View MSA
122794933 5272 Eudicot View MSA
122043519 5273 Angiosperm View MSA
121350769 5274 Embryophyte View MSA
123425613 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.043       High
cufflinks 3.728        
cufflinks 4.862        
cufflinks 1.567       Low
cufflinks 3.697        
cufflinks 1.733       Low
cufflinks 4.363        
cufflinks 4.512        
cufflinks 3.101        

0 Strain