Gene : Medtr1g046360 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19288:SF25 - PHOSPHATIDYLGLYCEROPHOSPHATASE GEP4, MITOCHONDRIAL Description:  haloacid dehalogenase superfamily protein
Genomic Order:  2286 Name:  ? Medtr1g046360
Secondary Identifier:  ? PAC:31094996
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY4FS-7 Medicago truncatula pathologic  
Mtruncatula PWY-5269 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g046360 0.5kb upstream 0.5kb upstream 5965 true chr1: 17475887-17481851 Medicago truncatula
Medtr1g046360 0.5kb upstream 0.5kb upstream 500 false chr1: 17481352-17481851 Medicago truncatula
Medtr1g046360 0.5kb downstream 0.5kb downstream 5965 true chr1: 17475387-17481351 Medicago truncatula
Medtr1g046360 0.5kb downstream 0.5kb downstream 500 false chr1: 17475387-17475886 Medicago truncatula
Medtr1g046360 1.0kb upstream 1.0kb upstream 6465 true chr1: 17475887-17482351 Medicago truncatula
Medtr1g046360 1.0kb upstream 1.0kb upstream 1000 false chr1: 17481352-17482351 Medicago truncatula
Medtr1g046360 1.0kb downstream 1.0kb downstream 6465 true chr1: 17474887-17481351 Medicago truncatula
Medtr1g046360 1.0kb downstream 1.0kb downstream 1000 false chr1: 17474887-17475886 Medicago truncatula
Medtr1g046360 2.0kb upstream 2.0kb upstream 7465 true chr1: 17475887-17483351 Medicago truncatula
Medtr1g046360 2.0kb upstream 2.0kb upstream 2000 false chr1: 17481352-17483351 Medicago truncatula
Medtr1g046360 2.0kb downstream 2.0kb downstream 7465 true chr1: 17473887-17481351 Medicago truncatula
Medtr1g046360 2.0kb downstream 2.0kb downstream 2000 false chr1: 17473887-17475886 Medicago truncatula
Medtr1g046360 5.0kb upstream 5.0kb upstream 10465 true chr1: 17475887-17486351 Medicago truncatula
Medtr1g046360 5.0kb upstream 5.0kb upstream 5000 false chr1: 17481352-17486351 Medicago truncatula
Medtr1g046360 5.0kb downstream 5.0kb downstream 10465 true chr1: 17470887-17481351 Medicago truncatula
Medtr1g046360 5.0kb downstream 5.0kb downstream 5000 false chr1: 17470887-17475886 Medicago truncatula
Medtr1g046360 10.0kb upstream 10.0kb upstream 15465 true chr1: 17475887-17491351 Medicago truncatula
Medtr1g046360 10.0kb upstream 10.0kb upstream 10000 false chr1: 17481352-17491351 Medicago truncatula
Medtr1g046360 10.0kb downstream 10.0kb downstream 15465 true chr1: 17465887-17481351 Medicago truncatula
Medtr1g046360 10.0kb downstream 10.0kb downstream 10000 false chr1: 17465887-17475886 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301851 5265 Fabidae View MSA
124061153 5270 Rosid View MSA
123744955 5271 Pentapetalae View MSA
122787883 5272 Eudicot View MSA
122047314 5273 Angiosperm View MSA
121345007 5274 Embryophyte View MSA
123425553 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.387        
cufflinks 2.322        
cufflinks 2.915       High
cufflinks 0.962       Low
cufflinks 2.139        
cufflinks 0.983       Low
cufflinks 1.484        
cufflinks 2.277        
cufflinks 1.212        

0 Strain