Gene : Medtr1g029630 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG1929 - Nucleotide excision repair factor NEF2, RAD4/CUT5 component Description:  DNA topoisomerase 2-binding-like protein
Genomic Order:  1367 Name:  ? Medtr1g029630
Secondary Identifier:  ? PAC:31097954
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g029630 0.5kb upstream 0.5kb upstream 11422 true chr1: 10202528-10213949 Medicago truncatula
Medtr1g029630 0.5kb upstream 0.5kb upstream 500 false chr1: 10213450-10213949 Medicago truncatula
Medtr1g029630 0.5kb downstream 0.5kb downstream 11422 true chr1: 10202028-10213449 Medicago truncatula
Medtr1g029630 0.5kb downstream 0.5kb downstream 500 false chr1: 10202028-10202527 Medicago truncatula
Medtr1g029630 1.0kb upstream 1.0kb upstream 11922 true chr1: 10202528-10214449 Medicago truncatula
Medtr1g029630 1.0kb upstream 1.0kb upstream 1000 false chr1: 10213450-10214449 Medicago truncatula
Medtr1g029630 1.0kb downstream 1.0kb downstream 11922 true chr1: 10201528-10213449 Medicago truncatula
Medtr1g029630 1.0kb downstream 1.0kb downstream 1000 false chr1: 10201528-10202527 Medicago truncatula
Medtr1g029630 2.0kb upstream 2.0kb upstream 12922 true chr1: 10202528-10215449 Medicago truncatula
Medtr1g029630 2.0kb upstream 2.0kb upstream 2000 false chr1: 10213450-10215449 Medicago truncatula
Medtr1g029630 2.0kb downstream 2.0kb downstream 12922 true chr1: 10200528-10213449 Medicago truncatula
Medtr1g029630 2.0kb downstream 2.0kb downstream 2000 false chr1: 10200528-10202527 Medicago truncatula
Medtr1g029630 5.0kb upstream 5.0kb upstream 15922 true chr1: 10202528-10218449 Medicago truncatula
Medtr1g029630 5.0kb upstream 5.0kb upstream 5000 false chr1: 10213450-10218449 Medicago truncatula
Medtr1g029630 5.0kb downstream 5.0kb downstream 15922 true chr1: 10197528-10213449 Medicago truncatula
Medtr1g029630 5.0kb downstream 5.0kb downstream 5000 false chr1: 10197528-10202527 Medicago truncatula
Medtr1g029630 10.0kb upstream 10.0kb upstream 20922 true chr1: 10202528-10223449 Medicago truncatula
Medtr1g029630 10.0kb upstream 10.0kb upstream 10000 false chr1: 10213450-10223449 Medicago truncatula
Medtr1g029630 10.0kb downstream 10.0kb downstream 20922 true chr1: 10192528-10213449 Medicago truncatula
Medtr1g029630 10.0kb downstream 10.0kb downstream 10000 false chr1: 10192528-10202527 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306389 5265 Fabidae View MSA
124067352 5270 Rosid View MSA
123739984 5271 Pentapetalae View MSA
122791325 5272 Eudicot View MSA
122043112 5273 Angiosperm View MSA
121348037 5274 Embryophyte View MSA
123425629 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.688        
cufflinks 0.7        
cufflinks 1.103       High
cufflinks 0.108       Low
cufflinks 0.745        
cufflinks 0.087     Low Low
cufflinks 0.194        
cufflinks 1.083       High
cufflinks 0.192        

0 Strain