Gene : Medtr1g030580 M. truncatula Mt4.0v1
Defline:  (1 of 88) PF00892 - EamA-like transporter family (EamA) Description:  nodulin MtN21/EamA-like transporter family protein
Genomic Order:  1423 Name:  ? Medtr1g030580
Secondary Identifier:  ? PAC:31096626
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g030580 0.5kb upstream 0.5kb upstream 6410 true chr1: 10599616-10606025 Medicago truncatula
Medtr1g030580 0.5kb upstream 0.5kb upstream 500 false chr1: 10605526-10606025 Medicago truncatula
Medtr1g030580 0.5kb downstream 0.5kb downstream 6410 true chr1: 10599116-10605525 Medicago truncatula
Medtr1g030580 0.5kb downstream 0.5kb downstream 500 false chr1: 10599116-10599615 Medicago truncatula
Medtr1g030580 1.0kb upstream 1.0kb upstream 6910 true chr1: 10599616-10606525 Medicago truncatula
Medtr1g030580 1.0kb upstream 1.0kb upstream 1000 false chr1: 10605526-10606525 Medicago truncatula
Medtr1g030580 1.0kb downstream 1.0kb downstream 6910 true chr1: 10598616-10605525 Medicago truncatula
Medtr1g030580 1.0kb downstream 1.0kb downstream 1000 false chr1: 10598616-10599615 Medicago truncatula
Medtr1g030580 2.0kb upstream 2.0kb upstream 7910 true chr1: 10599616-10607525 Medicago truncatula
Medtr1g030580 2.0kb upstream 2.0kb upstream 2000 false chr1: 10605526-10607525 Medicago truncatula
Medtr1g030580 2.0kb downstream 2.0kb downstream 7910 true chr1: 10597616-10605525 Medicago truncatula
Medtr1g030580 2.0kb downstream 2.0kb downstream 2000 false chr1: 10597616-10599615 Medicago truncatula
Medtr1g030580 5.0kb upstream 5.0kb upstream 10910 true chr1: 10599616-10610525 Medicago truncatula
Medtr1g030580 5.0kb upstream 5.0kb upstream 5000 false chr1: 10605526-10610525 Medicago truncatula
Medtr1g030580 5.0kb downstream 5.0kb downstream 10910 true chr1: 10594616-10605525 Medicago truncatula
Medtr1g030580 5.0kb downstream 5.0kb downstream 5000 false chr1: 10594616-10599615 Medicago truncatula
Medtr1g030580 10.0kb upstream 10.0kb upstream 15910 true chr1: 10599616-10615525 Medicago truncatula
Medtr1g030580 10.0kb upstream 10.0kb upstream 10000 false chr1: 10605526-10615525 Medicago truncatula
Medtr1g030580 10.0kb downstream 10.0kb downstream 15910 true chr1: 10589616-10605525 Medicago truncatula
Medtr1g030580 10.0kb downstream 10.0kb downstream 10000 false chr1: 10589616-10599615 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309690 5265 Fabidae View MSA
124065362 5270 Rosid View MSA
123750992 5271 Pentapetalae View MSA
122796473 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.491     High  
cufflinks 5.977        
cufflinks 5.817        
cufflinks 124.461     High High
cufflinks 2.45       Low
cufflinks 29.869     High  
cufflinks 166.922     High High
cufflinks 6.863        
cufflinks 72.669     High  

0 Strain