Gene : Medtr1g031680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33270:SF5 - GB Description:  senescence-associated protein, putative
Genomic Order:  1483 Name:  ? Medtr1g031680
Secondary Identifier:  ? PAC:31097625
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g031680 0.5kb upstream 0.5kb upstream 2796 true chr1: 11080885-11083680 Medicago truncatula
Medtr1g031680 0.5kb upstream 0.5kb upstream 500 false chr1: 11080885-11081384 Medicago truncatula
Medtr1g031680 0.5kb downstream 0.5kb downstream 2796 true chr1: 11081385-11084180 Medicago truncatula
Medtr1g031680 0.5kb downstream 0.5kb downstream 500 false chr1: 11083681-11084180 Medicago truncatula
Medtr1g031680 1.0kb upstream 1.0kb upstream 3296 true chr1: 11080385-11083680 Medicago truncatula
Medtr1g031680 1.0kb upstream 1.0kb upstream 1000 false chr1: 11080385-11081384 Medicago truncatula
Medtr1g031680 1.0kb downstream 1.0kb downstream 3296 true chr1: 11081385-11084680 Medicago truncatula
Medtr1g031680 1.0kb downstream 1.0kb downstream 1000 false chr1: 11083681-11084680 Medicago truncatula
Medtr1g031680 2.0kb upstream 2.0kb upstream 4296 true chr1: 11079385-11083680 Medicago truncatula
Medtr1g031680 2.0kb upstream 2.0kb upstream 2000 false chr1: 11079385-11081384 Medicago truncatula
Medtr1g031680 2.0kb downstream 2.0kb downstream 4296 true chr1: 11081385-11085680 Medicago truncatula
Medtr1g031680 2.0kb downstream 2.0kb downstream 2000 false chr1: 11083681-11085680 Medicago truncatula
Medtr1g031680 5.0kb upstream 5.0kb upstream 7296 true chr1: 11076385-11083680 Medicago truncatula
Medtr1g031680 5.0kb upstream 5.0kb upstream 5000 false chr1: 11076385-11081384 Medicago truncatula
Medtr1g031680 5.0kb downstream 5.0kb downstream 7296 true chr1: 11081385-11088680 Medicago truncatula
Medtr1g031680 5.0kb downstream 5.0kb downstream 5000 false chr1: 11083681-11088680 Medicago truncatula
Medtr1g031680 10.0kb upstream 10.0kb upstream 12296 true chr1: 11071385-11083680 Medicago truncatula
Medtr1g031680 10.0kb upstream 10.0kb upstream 10000 false chr1: 11071385-11081384 Medicago truncatula
Medtr1g031680 10.0kb downstream 10.0kb downstream 12296 true chr1: 11081385-11093680 Medicago truncatula
Medtr1g031680 10.0kb downstream 10.0kb downstream 10000 false chr1: 11083681-11093680 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304471 5265 Fabidae View MSA
124068577 5270 Rosid View MSA
123740302 5271 Pentapetalae View MSA
122797585 5272 Eudicot View MSA
122049795 5273 Angiosperm View MSA
121311591 5274 Embryophyte View MSA
123348867 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.18        
cufflinks 5.087       Low
cufflinks 7.3        
cufflinks 32.533     High High
cufflinks 7.902        
cufflinks 31.325     High High
cufflinks 14.237     High  
cufflinks 4.948       Low
cufflinks 21.527     High  

0 Strain