Gene : Medtr1g031140 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24031:SF50 - DEAD/DEAH BOX RNA HELICASE FAMILY PROTEIN Description:  ATP-dependent DNA helicase RecG
Genomic Order:  1445 Name:  ? Medtr1g031140
Secondary Identifier:  ? PAC:31097094
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g031140 0.5kb upstream 0.5kb upstream 18305 true chr1: 10858818-10877122 Medicago truncatula
Medtr1g031140 0.5kb upstream 0.5kb upstream 500 false chr1: 10876623-10877122 Medicago truncatula
Medtr1g031140 0.5kb downstream 0.5kb downstream 18305 true chr1: 10858318-10876622 Medicago truncatula
Medtr1g031140 0.5kb downstream 0.5kb downstream 500 false chr1: 10858318-10858817 Medicago truncatula
Medtr1g031140 1.0kb upstream 1.0kb upstream 18805 true chr1: 10858818-10877622 Medicago truncatula
Medtr1g031140 1.0kb upstream 1.0kb upstream 1000 false chr1: 10876623-10877622 Medicago truncatula
Medtr1g031140 1.0kb downstream 1.0kb downstream 18805 true chr1: 10857818-10876622 Medicago truncatula
Medtr1g031140 1.0kb downstream 1.0kb downstream 1000 false chr1: 10857818-10858817 Medicago truncatula
Medtr1g031140 2.0kb upstream 2.0kb upstream 19805 true chr1: 10858818-10878622 Medicago truncatula
Medtr1g031140 2.0kb upstream 2.0kb upstream 2000 false chr1: 10876623-10878622 Medicago truncatula
Medtr1g031140 2.0kb downstream 2.0kb downstream 19805 true chr1: 10856818-10876622 Medicago truncatula
Medtr1g031140 2.0kb downstream 2.0kb downstream 2000 false chr1: 10856818-10858817 Medicago truncatula
Medtr1g031140 5.0kb upstream 5.0kb upstream 22805 true chr1: 10858818-10881622 Medicago truncatula
Medtr1g031140 5.0kb upstream 5.0kb upstream 5000 false chr1: 10876623-10881622 Medicago truncatula
Medtr1g031140 5.0kb downstream 5.0kb downstream 22805 true chr1: 10853818-10876622 Medicago truncatula
Medtr1g031140 5.0kb downstream 5.0kb downstream 5000 false chr1: 10853818-10858817 Medicago truncatula
Medtr1g031140 10.0kb upstream 10.0kb upstream 27805 true chr1: 10858818-10886622 Medicago truncatula
Medtr1g031140 10.0kb upstream 10.0kb upstream 10000 false chr1: 10876623-10886622 Medicago truncatula
Medtr1g031140 10.0kb downstream 10.0kb downstream 27805 true chr1: 10848818-10876622 Medicago truncatula
Medtr1g031140 10.0kb downstream 10.0kb downstream 10000 false chr1: 10848818-10858817 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041472 5273 Angiosperm View MSA
122307794 5265 Fabidae View MSA
124072269 5270 Rosid View MSA
123749216 5271 Pentapetalae View MSA
122790449 5272 Eudicot View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.098        
cufflinks 0.48        
cufflinks 0.403        
cufflinks 0.043     Low Low
cufflinks 0.688       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.129        
cufflinks 0.357        
cufflinks 0.141        

0 Strain