Gene : Medtr1g032200 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15555 - ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED Description:  HIT zinc finger protein
Genomic Order:  1517 Name:  ? Medtr1g032200
Secondary Identifier:  ? PAC:31100318
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g032200 0.5kb upstream 0.5kb upstream 7756 true chr1: 11411751-11419506 Medicago truncatula
Medtr1g032200 0.5kb upstream 0.5kb upstream 500 false chr1: 11411751-11412250 Medicago truncatula
Medtr1g032200 0.5kb downstream 0.5kb downstream 7756 true chr1: 11412251-11420006 Medicago truncatula
Medtr1g032200 0.5kb downstream 0.5kb downstream 500 false chr1: 11419507-11420006 Medicago truncatula
Medtr1g032200 1.0kb upstream 1.0kb upstream 8256 true chr1: 11411251-11419506 Medicago truncatula
Medtr1g032200 1.0kb upstream 1.0kb upstream 1000 false chr1: 11411251-11412250 Medicago truncatula
Medtr1g032200 1.0kb downstream 1.0kb downstream 8256 true chr1: 11412251-11420506 Medicago truncatula
Medtr1g032200 1.0kb downstream 1.0kb downstream 1000 false chr1: 11419507-11420506 Medicago truncatula
Medtr1g032200 2.0kb upstream 2.0kb upstream 9256 true chr1: 11410251-11419506 Medicago truncatula
Medtr1g032200 2.0kb upstream 2.0kb upstream 2000 false chr1: 11410251-11412250 Medicago truncatula
Medtr1g032200 2.0kb downstream 2.0kb downstream 9256 true chr1: 11412251-11421506 Medicago truncatula
Medtr1g032200 2.0kb downstream 2.0kb downstream 2000 false chr1: 11419507-11421506 Medicago truncatula
Medtr1g032200 5.0kb upstream 5.0kb upstream 12256 true chr1: 11407251-11419506 Medicago truncatula
Medtr1g032200 5.0kb upstream 5.0kb upstream 5000 false chr1: 11407251-11412250 Medicago truncatula
Medtr1g032200 5.0kb downstream 5.0kb downstream 12256 true chr1: 11412251-11424506 Medicago truncatula
Medtr1g032200 5.0kb downstream 5.0kb downstream 5000 false chr1: 11419507-11424506 Medicago truncatula
Medtr1g032200 10.0kb upstream 10.0kb upstream 17256 true chr1: 11402251-11419506 Medicago truncatula
Medtr1g032200 10.0kb upstream 10.0kb upstream 10000 false chr1: 11402251-11412250 Medicago truncatula
Medtr1g032200 10.0kb downstream 10.0kb downstream 17256 true chr1: 11412251-11429506 Medicago truncatula
Medtr1g032200 10.0kb downstream 10.0kb downstream 10000 false chr1: 11419507-11429506 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306801 5265 Fabidae View MSA
124061111 5270 Rosid View MSA
123740559 5271 Pentapetalae View MSA
122788257 5272 Eudicot View MSA
122044009 5273 Angiosperm View MSA
121344053 5274 Embryophyte View MSA
123425257 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.382        
cufflinks 0.185        
cufflinks 0.268        
cufflinks 0.08       Low
cufflinks 0.524       High
cufflinks 0.06     Low Low
cufflinks 0.301        
cufflinks 0.226        
cufflinks 0.287        

0 Strain