Gene : Medtr1g034060 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR10209//PTHR10209:SF98 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN Description:  gibberellin 2-beta-dioxygenase
Genomic Order:  1650 Name:  ? Medtr1g034060
Secondary Identifier:  ? PAC:31094839
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g034060 0.5kb upstream 0.5kb upstream 4117 true chr1: 12320838-12324954 Medicago truncatula
Medtr1g034060 0.5kb upstream 0.5kb upstream 500 false chr1: 12324455-12324954 Medicago truncatula
Medtr1g034060 0.5kb downstream 0.5kb downstream 4117 true chr1: 12320338-12324454 Medicago truncatula
Medtr1g034060 0.5kb downstream 0.5kb downstream 500 false chr1: 12320338-12320837 Medicago truncatula
Medtr1g034060 1.0kb upstream 1.0kb upstream 4617 true chr1: 12320838-12325454 Medicago truncatula
Medtr1g034060 1.0kb upstream 1.0kb upstream 1000 false chr1: 12324455-12325454 Medicago truncatula
Medtr1g034060 1.0kb downstream 1.0kb downstream 4617 true chr1: 12319838-12324454 Medicago truncatula
Medtr1g034060 1.0kb downstream 1.0kb downstream 1000 false chr1: 12319838-12320837 Medicago truncatula
Medtr1g034060 2.0kb upstream 2.0kb upstream 5617 true chr1: 12320838-12326454 Medicago truncatula
Medtr1g034060 2.0kb upstream 2.0kb upstream 2000 false chr1: 12324455-12326454 Medicago truncatula
Medtr1g034060 2.0kb downstream 2.0kb downstream 5617 true chr1: 12318838-12324454 Medicago truncatula
Medtr1g034060 2.0kb downstream 2.0kb downstream 2000 false chr1: 12318838-12320837 Medicago truncatula
Medtr1g034060 5.0kb upstream 5.0kb upstream 8617 true chr1: 12320838-12329454 Medicago truncatula
Medtr1g034060 5.0kb upstream 5.0kb upstream 5000 false chr1: 12324455-12329454 Medicago truncatula
Medtr1g034060 5.0kb downstream 5.0kb downstream 8617 true chr1: 12315838-12324454 Medicago truncatula
Medtr1g034060 5.0kb downstream 5.0kb downstream 5000 false chr1: 12315838-12320837 Medicago truncatula
Medtr1g034060 10.0kb upstream 10.0kb upstream 13617 true chr1: 12320838-12334454 Medicago truncatula
Medtr1g034060 10.0kb upstream 10.0kb upstream 10000 false chr1: 12324455-12334454 Medicago truncatula
Medtr1g034060 10.0kb downstream 10.0kb downstream 13617 true chr1: 12310838-12324454 Medicago truncatula
Medtr1g034060 10.0kb downstream 10.0kb downstream 10000 false chr1: 12310838-12320837 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310843 5265 Fabidae View MSA
124074691 5270 Rosid View MSA
123748352 5271 Pentapetalae View MSA
122795529 5272 Eudicot View MSA
122043362 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121349353 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.198       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.477        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.346        
cufflinks 9.332       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.275        

0 Strain