Gene : Medtr1g035420 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR22884:SF95 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH7-RELATED Description:  histone-lysine N-methyltransferase, suvh protein, putative
Genomic Order:  1715 Name:  ? Medtr1g035420
Secondary Identifier:  ? PAC:31095801
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g035420 0.5kb upstream 0.5kb upstream 6261 true chr1: 12857482-12863742 Medicago truncatula
Medtr1g035420 0.5kb upstream 0.5kb upstream 500 false chr1: 12857482-12857981 Medicago truncatula
Medtr1g035420 0.5kb downstream 0.5kb downstream 6261 true chr1: 12857982-12864242 Medicago truncatula
Medtr1g035420 0.5kb downstream 0.5kb downstream 500 false chr1: 12863743-12864242 Medicago truncatula
Medtr1g035420 1.0kb upstream 1.0kb upstream 6761 true chr1: 12856982-12863742 Medicago truncatula
Medtr1g035420 1.0kb upstream 1.0kb upstream 1000 false chr1: 12856982-12857981 Medicago truncatula
Medtr1g035420 1.0kb downstream 1.0kb downstream 6761 true chr1: 12857982-12864742 Medicago truncatula
Medtr1g035420 1.0kb downstream 1.0kb downstream 1000 false chr1: 12863743-12864742 Medicago truncatula
Medtr1g035420 2.0kb upstream 2.0kb upstream 7761 true chr1: 12855982-12863742 Medicago truncatula
Medtr1g035420 2.0kb upstream 2.0kb upstream 2000 false chr1: 12855982-12857981 Medicago truncatula
Medtr1g035420 2.0kb downstream 2.0kb downstream 7761 true chr1: 12857982-12865742 Medicago truncatula
Medtr1g035420 2.0kb downstream 2.0kb downstream 2000 false chr1: 12863743-12865742 Medicago truncatula
Medtr1g035420 5.0kb upstream 5.0kb upstream 10761 true chr1: 12852982-12863742 Medicago truncatula
Medtr1g035420 5.0kb upstream 5.0kb upstream 5000 false chr1: 12852982-12857981 Medicago truncatula
Medtr1g035420 5.0kb downstream 5.0kb downstream 10761 true chr1: 12857982-12868742 Medicago truncatula
Medtr1g035420 5.0kb downstream 5.0kb downstream 5000 false chr1: 12863743-12868742 Medicago truncatula
Medtr1g035420 10.0kb upstream 10.0kb upstream 15761 true chr1: 12847982-12863742 Medicago truncatula
Medtr1g035420 10.0kb upstream 10.0kb upstream 10000 false chr1: 12847982-12857981 Medicago truncatula
Medtr1g035420 10.0kb downstream 10.0kb downstream 15761 true chr1: 12857982-12873742 Medicago truncatula
Medtr1g035420 10.0kb downstream 10.0kb downstream 10000 false chr1: 12863743-12873742 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315293 5265 Fabidae View MSA
124067022 5270 Rosid View MSA
123743213 5271 Pentapetalae View MSA
122789525 5272 Eudicot View MSA
122047212 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121310709 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.922        
cufflinks 1.131        
cufflinks 1.158        
cufflinks 0.758       Low
cufflinks 1.397       High
cufflinks 0.672       Low
cufflinks 0.824        
cufflinks 0.948        
cufflinks 1.037        

0 Strain