Gene : Medtr1g073890 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31371:SF2 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14B15 Description:  DUF3475 domain protein
Genomic Order:  3973 Name:  ? Medtr1g073890
Secondary Identifier:  ? PAC:31098252
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g073890 0.5kb upstream 0.5kb upstream 2909 true chr1: 32818643-32821551 Medicago truncatula
Medtr1g073890 0.5kb upstream 0.5kb upstream 500 false chr1: 32821052-32821551 Medicago truncatula
Medtr1g073890 0.5kb downstream 0.5kb downstream 2909 true chr1: 32818143-32821051 Medicago truncatula
Medtr1g073890 0.5kb downstream 0.5kb downstream 500 false chr1: 32818143-32818642 Medicago truncatula
Medtr1g073890 1.0kb upstream 1.0kb upstream 3409 true chr1: 32818643-32822051 Medicago truncatula
Medtr1g073890 1.0kb upstream 1.0kb upstream 1000 false chr1: 32821052-32822051 Medicago truncatula
Medtr1g073890 1.0kb downstream 1.0kb downstream 3409 true chr1: 32817643-32821051 Medicago truncatula
Medtr1g073890 1.0kb downstream 1.0kb downstream 1000 false chr1: 32817643-32818642 Medicago truncatula
Medtr1g073890 2.0kb upstream 2.0kb upstream 4409 true chr1: 32818643-32823051 Medicago truncatula
Medtr1g073890 2.0kb upstream 2.0kb upstream 2000 false chr1: 32821052-32823051 Medicago truncatula
Medtr1g073890 2.0kb downstream 2.0kb downstream 4409 true chr1: 32816643-32821051 Medicago truncatula
Medtr1g073890 2.0kb downstream 2.0kb downstream 2000 false chr1: 32816643-32818642 Medicago truncatula
Medtr1g073890 5.0kb upstream 5.0kb upstream 7409 true chr1: 32818643-32826051 Medicago truncatula
Medtr1g073890 5.0kb upstream 5.0kb upstream 5000 false chr1: 32821052-32826051 Medicago truncatula
Medtr1g073890 5.0kb downstream 5.0kb downstream 7409 true chr1: 32813643-32821051 Medicago truncatula
Medtr1g073890 5.0kb downstream 5.0kb downstream 5000 false chr1: 32813643-32818642 Medicago truncatula
Medtr1g073890 10.0kb upstream 10.0kb upstream 12409 true chr1: 32818643-32831051 Medicago truncatula
Medtr1g073890 10.0kb upstream 10.0kb upstream 10000 false chr1: 32821052-32831051 Medicago truncatula
Medtr1g073890 10.0kb downstream 10.0kb downstream 12409 true chr1: 32808643-32821051 Medicago truncatula
Medtr1g073890 10.0kb downstream 10.0kb downstream 10000 false chr1: 32808643-32818642 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295818 5265 Fabidae View MSA
124066991 5270 Rosid View MSA
123748121 5271 Pentapetalae View MSA
122787912 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.012       High
cufflinks 2.583        
cufflinks 5.691        
cufflinks 4.419        
cufflinks 4.591        
cufflinks 2.337       Low
cufflinks 5.122        
cufflinks 2.989        
cufflinks 2.876        

0 Strain