Gene : Medtr1g073940 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF05514 - HR-like lesion-inducing (HR_lesion) Description:  HR-like lesion-inducing protein
Genomic Order:  3977 Name:  ? Medtr1g073940
Secondary Identifier:  ? PAC:31093450
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g073940 0.5kb upstream 0.5kb upstream 2925 true chr1: 32858292-32861216 Medicago truncatula
Medtr1g073940 0.5kb upstream 0.5kb upstream 500 false chr1: 32860717-32861216 Medicago truncatula
Medtr1g073940 0.5kb downstream 0.5kb downstream 2925 true chr1: 32857792-32860716 Medicago truncatula
Medtr1g073940 0.5kb downstream 0.5kb downstream 500 false chr1: 32857792-32858291 Medicago truncatula
Medtr1g073940 1.0kb upstream 1.0kb upstream 3425 true chr1: 32858292-32861716 Medicago truncatula
Medtr1g073940 1.0kb upstream 1.0kb upstream 1000 false chr1: 32860717-32861716 Medicago truncatula
Medtr1g073940 1.0kb downstream 1.0kb downstream 3425 true chr1: 32857292-32860716 Medicago truncatula
Medtr1g073940 1.0kb downstream 1.0kb downstream 1000 false chr1: 32857292-32858291 Medicago truncatula
Medtr1g073940 2.0kb upstream 2.0kb upstream 4425 true chr1: 32858292-32862716 Medicago truncatula
Medtr1g073940 2.0kb upstream 2.0kb upstream 2000 false chr1: 32860717-32862716 Medicago truncatula
Medtr1g073940 2.0kb downstream 2.0kb downstream 4425 true chr1: 32856292-32860716 Medicago truncatula
Medtr1g073940 2.0kb downstream 2.0kb downstream 2000 false chr1: 32856292-32858291 Medicago truncatula
Medtr1g073940 5.0kb upstream 5.0kb upstream 7425 true chr1: 32858292-32865716 Medicago truncatula
Medtr1g073940 5.0kb upstream 5.0kb upstream 5000 false chr1: 32860717-32865716 Medicago truncatula
Medtr1g073940 5.0kb downstream 5.0kb downstream 7425 true chr1: 32853292-32860716 Medicago truncatula
Medtr1g073940 5.0kb downstream 5.0kb downstream 5000 false chr1: 32853292-32858291 Medicago truncatula
Medtr1g073940 10.0kb upstream 10.0kb upstream 12425 true chr1: 32858292-32870716 Medicago truncatula
Medtr1g073940 10.0kb upstream 10.0kb upstream 10000 false chr1: 32860717-32870716 Medicago truncatula
Medtr1g073940 10.0kb downstream 10.0kb downstream 12425 true chr1: 32848292-32860716 Medicago truncatula
Medtr1g073940 10.0kb downstream 10.0kb downstream 10000 false chr1: 32848292-32858291 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306907 5265 Fabidae View MSA
124068241 5270 Rosid View MSA
123750516 5271 Pentapetalae View MSA
122797406 5272 Eudicot View MSA
122050658 5273 Angiosperm View MSA
121351347 5274 Embryophyte View MSA
123426506 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.317     High  
cufflinks 8.635        
cufflinks 10.087     High  
cufflinks 49.605     High High
cufflinks 8.532        
cufflinks 50.675     High High
cufflinks 24.795     High  
cufflinks 8.432        
cufflinks 31.106     High  

0 Strain