Gene : Medtr1g075740 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Description:  COP1-interacting-like protein
Genomic Order:  4078 Name:  ? Medtr1g075740
Secondary Identifier:  ? PAC:31100054
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g075740 0.5kb upstream 0.5kb upstream 9746 true chr1: 33556117-33565862 Medicago truncatula
Medtr1g075740 0.5kb upstream 0.5kb upstream 500 false chr1: 33565363-33565862 Medicago truncatula
Medtr1g075740 0.5kb downstream 0.5kb downstream 9746 true chr1: 33555617-33565362 Medicago truncatula
Medtr1g075740 0.5kb downstream 0.5kb downstream 500 false chr1: 33555617-33556116 Medicago truncatula
Medtr1g075740 1.0kb upstream 1.0kb upstream 10246 true chr1: 33556117-33566362 Medicago truncatula
Medtr1g075740 1.0kb upstream 1.0kb upstream 1000 false chr1: 33565363-33566362 Medicago truncatula
Medtr1g075740 1.0kb downstream 1.0kb downstream 10246 true chr1: 33555117-33565362 Medicago truncatula
Medtr1g075740 1.0kb downstream 1.0kb downstream 1000 false chr1: 33555117-33556116 Medicago truncatula
Medtr1g075740 2.0kb upstream 2.0kb upstream 11246 true chr1: 33556117-33567362 Medicago truncatula
Medtr1g075740 2.0kb upstream 2.0kb upstream 2000 false chr1: 33565363-33567362 Medicago truncatula
Medtr1g075740 2.0kb downstream 2.0kb downstream 11246 true chr1: 33554117-33565362 Medicago truncatula
Medtr1g075740 2.0kb downstream 2.0kb downstream 2000 false chr1: 33554117-33556116 Medicago truncatula
Medtr1g075740 5.0kb upstream 5.0kb upstream 14246 true chr1: 33556117-33570362 Medicago truncatula
Medtr1g075740 5.0kb upstream 5.0kb upstream 5000 false chr1: 33565363-33570362 Medicago truncatula
Medtr1g075740 5.0kb downstream 5.0kb downstream 14246 true chr1: 33551117-33565362 Medicago truncatula
Medtr1g075740 5.0kb downstream 5.0kb downstream 5000 false chr1: 33551117-33556116 Medicago truncatula
Medtr1g075740 10.0kb upstream 10.0kb upstream 19246 true chr1: 33556117-33575362 Medicago truncatula
Medtr1g075740 10.0kb upstream 10.0kb upstream 10000 false chr1: 33565363-33575362 Medicago truncatula
Medtr1g075740 10.0kb downstream 10.0kb downstream 19246 true chr1: 33546117-33565362 Medicago truncatula
Medtr1g075740 10.0kb downstream 10.0kb downstream 10000 false chr1: 33546117-33556116 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299978 5265 Fabidae View MSA
124060773 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.074        
cufflinks 2.317        
cufflinks 1.574        
cufflinks 0.445       Low
cufflinks 2.424        
cufflinks 0.213       Low
cufflinks 0.983        
cufflinks 1.325        
cufflinks 1.197        

0 Strain