Gene : Medtr1g087920 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31190:SF27 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED Description:  ethylene response factor
Genomic Order:  4848 Name:  ? Medtr1g087920
Secondary Identifier:  ? PAC:31096953
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g087920 0.5kb upstream 0.5kb upstream 2051 true chr1: 39359224-39361274 Medicago truncatula
Medtr1g087920 0.5kb upstream 0.5kb upstream 500 false chr1: 39359224-39359723 Medicago truncatula
Medtr1g087920 0.5kb downstream 0.5kb downstream 2051 true chr1: 39359724-39361774 Medicago truncatula
Medtr1g087920 0.5kb downstream 0.5kb downstream 500 false chr1: 39361275-39361774 Medicago truncatula
Medtr1g087920 1.0kb upstream 1.0kb upstream 2551 true chr1: 39358724-39361274 Medicago truncatula
Medtr1g087920 1.0kb upstream 1.0kb upstream 1000 false chr1: 39358724-39359723 Medicago truncatula
Medtr1g087920 1.0kb downstream 1.0kb downstream 2551 true chr1: 39359724-39362274 Medicago truncatula
Medtr1g087920 1.0kb downstream 1.0kb downstream 1000 false chr1: 39361275-39362274 Medicago truncatula
Medtr1g087920 2.0kb upstream 2.0kb upstream 3551 true chr1: 39357724-39361274 Medicago truncatula
Medtr1g087920 2.0kb upstream 2.0kb upstream 2000 false chr1: 39357724-39359723 Medicago truncatula
Medtr1g087920 2.0kb downstream 2.0kb downstream 3551 true chr1: 39359724-39363274 Medicago truncatula
Medtr1g087920 2.0kb downstream 2.0kb downstream 2000 false chr1: 39361275-39363274 Medicago truncatula
Medtr1g087920 5.0kb upstream 5.0kb upstream 6551 true chr1: 39354724-39361274 Medicago truncatula
Medtr1g087920 5.0kb upstream 5.0kb upstream 5000 false chr1: 39354724-39359723 Medicago truncatula
Medtr1g087920 5.0kb downstream 5.0kb downstream 6551 true chr1: 39359724-39366274 Medicago truncatula
Medtr1g087920 5.0kb downstream 5.0kb downstream 5000 false chr1: 39361275-39366274 Medicago truncatula
Medtr1g087920 10.0kb upstream 10.0kb upstream 11551 true chr1: 39349724-39361274 Medicago truncatula
Medtr1g087920 10.0kb upstream 10.0kb upstream 10000 false chr1: 39349724-39359723 Medicago truncatula
Medtr1g087920 10.0kb downstream 10.0kb downstream 11551 true chr1: 39359724-39371274 Medicago truncatula
Medtr1g087920 10.0kb downstream 10.0kb downstream 10000 false chr1: 39361275-39371274 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304370 5265 Fabidae View MSA
124073164 5270 Rosid View MSA
123751106 5271 Pentapetalae View MSA
122797584 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 513.71     High High
cufflinks 47.618     High  
cufflinks 32.809     High Low
cufflinks 326.188     High  
cufflinks 34.074     High Low
cufflinks 107.018     High  
cufflinks 570.707     High High
cufflinks 34.926     High Low
cufflinks 573.044     High High

0 Strain