Gene : Medtr1g087935 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR33470:SF1 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Description:  pollen Ole e I family allergens
Genomic Order:  4849 Name:  ? Medtr1g087935
Secondary Identifier:  ? PAC:31100021
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g087935 0.5kb upstream 0.5kb upstream 2030 true chr1: 39369974-39372003 Medicago truncatula
Medtr1g087935 0.5kb upstream 0.5kb upstream 500 false chr1: 39369974-39370473 Medicago truncatula
Medtr1g087935 0.5kb downstream 0.5kb downstream 2030 true chr1: 39370474-39372503 Medicago truncatula
Medtr1g087935 0.5kb downstream 0.5kb downstream 500 false chr1: 39372004-39372503 Medicago truncatula
Medtr1g087935 1.0kb upstream 1.0kb upstream 2530 true chr1: 39369474-39372003 Medicago truncatula
Medtr1g087935 1.0kb upstream 1.0kb upstream 1000 false chr1: 39369474-39370473 Medicago truncatula
Medtr1g087935 1.0kb downstream 1.0kb downstream 2530 true chr1: 39370474-39373003 Medicago truncatula
Medtr1g087935 1.0kb downstream 1.0kb downstream 1000 false chr1: 39372004-39373003 Medicago truncatula
Medtr1g087935 2.0kb upstream 2.0kb upstream 3530 true chr1: 39368474-39372003 Medicago truncatula
Medtr1g087935 2.0kb upstream 2.0kb upstream 2000 false chr1: 39368474-39370473 Medicago truncatula
Medtr1g087935 2.0kb downstream 2.0kb downstream 3530 true chr1: 39370474-39374003 Medicago truncatula
Medtr1g087935 2.0kb downstream 2.0kb downstream 2000 false chr1: 39372004-39374003 Medicago truncatula
Medtr1g087935 5.0kb upstream 5.0kb upstream 6530 true chr1: 39365474-39372003 Medicago truncatula
Medtr1g087935 5.0kb upstream 5.0kb upstream 5000 false chr1: 39365474-39370473 Medicago truncatula
Medtr1g087935 5.0kb downstream 5.0kb downstream 6530 true chr1: 39370474-39377003 Medicago truncatula
Medtr1g087935 5.0kb downstream 5.0kb downstream 5000 false chr1: 39372004-39377003 Medicago truncatula
Medtr1g087935 10.0kb upstream 10.0kb upstream 11530 true chr1: 39360474-39372003 Medicago truncatula
Medtr1g087935 10.0kb upstream 10.0kb upstream 10000 false chr1: 39360474-39370473 Medicago truncatula
Medtr1g087935 10.0kb downstream 10.0kb downstream 11530 true chr1: 39370474-39382003 Medicago truncatula
Medtr1g087935 10.0kb downstream 10.0kb downstream 10000 false chr1: 39372004-39382003 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298665 5265 Fabidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain