Gene : Medtr1g087040 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22952//PTHR22952:SF167 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Description:  BZIP transcription factor
Genomic Order:  4796 Name:  ? Medtr1g087040
Secondary Identifier:  ? PAC:31100832
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g087040 0.5kb upstream 0.5kb upstream 1707 true chr1: 38962649-38964355 Medicago truncatula
Medtr1g087040 0.5kb upstream 0.5kb upstream 500 false chr1: 38963856-38964355 Medicago truncatula
Medtr1g087040 0.5kb downstream 0.5kb downstream 1707 true chr1: 38962149-38963855 Medicago truncatula
Medtr1g087040 0.5kb downstream 0.5kb downstream 500 false chr1: 38962149-38962648 Medicago truncatula
Medtr1g087040 1.0kb upstream 1.0kb upstream 2207 true chr1: 38962649-38964855 Medicago truncatula
Medtr1g087040 1.0kb upstream 1.0kb upstream 1000 false chr1: 38963856-38964855 Medicago truncatula
Medtr1g087040 1.0kb downstream 1.0kb downstream 2207 true chr1: 38961649-38963855 Medicago truncatula
Medtr1g087040 1.0kb downstream 1.0kb downstream 1000 false chr1: 38961649-38962648 Medicago truncatula
Medtr1g087040 2.0kb upstream 2.0kb upstream 3207 true chr1: 38962649-38965855 Medicago truncatula
Medtr1g087040 2.0kb upstream 2.0kb upstream 2000 false chr1: 38963856-38965855 Medicago truncatula
Medtr1g087040 2.0kb downstream 2.0kb downstream 3207 true chr1: 38960649-38963855 Medicago truncatula
Medtr1g087040 2.0kb downstream 2.0kb downstream 2000 false chr1: 38960649-38962648 Medicago truncatula
Medtr1g087040 5.0kb upstream 5.0kb upstream 6207 true chr1: 38962649-38968855 Medicago truncatula
Medtr1g087040 5.0kb upstream 5.0kb upstream 5000 false chr1: 38963856-38968855 Medicago truncatula
Medtr1g087040 5.0kb downstream 5.0kb downstream 6207 true chr1: 38957649-38963855 Medicago truncatula
Medtr1g087040 5.0kb downstream 5.0kb downstream 5000 false chr1: 38957649-38962648 Medicago truncatula
Medtr1g087040 10.0kb upstream 10.0kb upstream 11207 true chr1: 38962649-38973855 Medicago truncatula
Medtr1g087040 10.0kb upstream 10.0kb upstream 10000 false chr1: 38963856-38973855 Medicago truncatula
Medtr1g087040 10.0kb downstream 10.0kb downstream 11207 true chr1: 38952649-38963855 Medicago truncatula
Medtr1g087040 10.0kb downstream 10.0kb downstream 10000 false chr1: 38952649-38962648 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311225 5265 Fabidae View MSA
124070376 5270 Rosid View MSA
123739534 5271 Pentapetalae View MSA
122793747 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 421.256     High  
cufflinks 167.605     High Low
cufflinks 219.462     High  
cufflinks 313.992     High  
cufflinks 207.745     High  
cufflinks 331.429     High  
cufflinks 510.51     High High
cufflinks 184.72     High Low
cufflinks 458.963     High High

0 Strain