Gene : Medtr1g069565 M. truncatula Mt4.0v1
Defline:  (1 of 16) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE Description:  transcription factor jumonji (JmjC) domain protein
Genomic Order:  3639 Name:  ? Medtr1g069565
Secondary Identifier:  ? PAC:31092778
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g069565 0.5kb upstream 0.5kb upstream 10947 true chr1: 30198834-30209780 Medicago truncatula
Medtr1g069565 0.5kb upstream 0.5kb upstream 500 false chr1: 30209281-30209780 Medicago truncatula
Medtr1g069565 0.5kb downstream 0.5kb downstream 10947 true chr1: 30198334-30209280 Medicago truncatula
Medtr1g069565 0.5kb downstream 0.5kb downstream 500 false chr1: 30198334-30198833 Medicago truncatula
Medtr1g069565 1.0kb upstream 1.0kb upstream 11447 true chr1: 30198834-30210280 Medicago truncatula
Medtr1g069565 1.0kb upstream 1.0kb upstream 1000 false chr1: 30209281-30210280 Medicago truncatula
Medtr1g069565 1.0kb downstream 1.0kb downstream 11447 true chr1: 30197834-30209280 Medicago truncatula
Medtr1g069565 1.0kb downstream 1.0kb downstream 1000 false chr1: 30197834-30198833 Medicago truncatula
Medtr1g069565 2.0kb upstream 2.0kb upstream 12447 true chr1: 30198834-30211280 Medicago truncatula
Medtr1g069565 2.0kb upstream 2.0kb upstream 2000 false chr1: 30209281-30211280 Medicago truncatula
Medtr1g069565 2.0kb downstream 2.0kb downstream 12447 true chr1: 30196834-30209280 Medicago truncatula
Medtr1g069565 2.0kb downstream 2.0kb downstream 2000 false chr1: 30196834-30198833 Medicago truncatula
Medtr1g069565 5.0kb upstream 5.0kb upstream 15447 true chr1: 30198834-30214280 Medicago truncatula
Medtr1g069565 5.0kb upstream 5.0kb upstream 5000 false chr1: 30209281-30214280 Medicago truncatula
Medtr1g069565 5.0kb downstream 5.0kb downstream 15447 true chr1: 30193834-30209280 Medicago truncatula
Medtr1g069565 5.0kb downstream 5.0kb downstream 5000 false chr1: 30193834-30198833 Medicago truncatula
Medtr1g069565 10.0kb upstream 10.0kb upstream 20447 true chr1: 30198834-30219280 Medicago truncatula
Medtr1g069565 10.0kb upstream 10.0kb upstream 10000 false chr1: 30209281-30219280 Medicago truncatula
Medtr1g069565 10.0kb downstream 10.0kb downstream 20447 true chr1: 30188834-30209280 Medicago truncatula
Medtr1g069565 10.0kb downstream 10.0kb downstream 10000 false chr1: 30188834-30198833 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314720 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.807       High
cufflinks 0.164        
cufflinks 0.204        
cufflinks 0.19        
cufflinks 0.279        
cufflinks 0.166        
cufflinks 0.209        
cufflinks 0.204        
cufflinks 0.177        

0 Strain