Gene : Medtr1g070205 M. truncatula Mt4.0v1

Defline:  (1 of 2) PTHR31529:SF2 - LOB DOMAIN-CONTAINING PROTEIN 17-RELATED Description:  lateral organ boundaries (LOB) domain protein
Genomic Order:  3724 Name:  ? Medtr1g070205
Secondary Identifier:  ? PAC:31093883

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g070205 0.5kb upstream 0.5kb upstream 1873 true chr1: 30903376-30905248 Medicago truncatula
Medtr1g070205 0.5kb upstream 0.5kb upstream 500 false chr1: 30903376-30903875 Medicago truncatula
Medtr1g070205 0.5kb downstream 0.5kb downstream 1873 true chr1: 30903876-30905748 Medicago truncatula
Medtr1g070205 0.5kb downstream 0.5kb downstream 500 false chr1: 30905249-30905748 Medicago truncatula
Medtr1g070205 1.0kb upstream 1.0kb upstream 2373 true chr1: 30902876-30905248 Medicago truncatula
Medtr1g070205 1.0kb upstream 1.0kb upstream 1000 false chr1: 30902876-30903875 Medicago truncatula
Medtr1g070205 1.0kb downstream 1.0kb downstream 2373 true chr1: 30903876-30906248 Medicago truncatula
Medtr1g070205 1.0kb downstream 1.0kb downstream 1000 false chr1: 30905249-30906248 Medicago truncatula
Medtr1g070205 2.0kb upstream 2.0kb upstream 3373 true chr1: 30901876-30905248 Medicago truncatula
Medtr1g070205 2.0kb upstream 2.0kb upstream 2000 false chr1: 30901876-30903875 Medicago truncatula
Medtr1g070205 2.0kb downstream 2.0kb downstream 3373 true chr1: 30903876-30907248 Medicago truncatula
Medtr1g070205 2.0kb downstream 2.0kb downstream 2000 false chr1: 30905249-30907248 Medicago truncatula
Medtr1g070205 5.0kb upstream 5.0kb upstream 6373 true chr1: 30898876-30905248 Medicago truncatula
Medtr1g070205 5.0kb upstream 5.0kb upstream 5000 false chr1: 30898876-30903875 Medicago truncatula
Medtr1g070205 5.0kb downstream 5.0kb downstream 6373 true chr1: 30903876-30910248 Medicago truncatula
Medtr1g070205 5.0kb downstream 5.0kb downstream 5000 false chr1: 30905249-30910248 Medicago truncatula
Medtr1g070205 10.0kb upstream 10.0kb upstream 11373 true chr1: 30893876-30905248 Medicago truncatula
Medtr1g070205 10.0kb upstream 10.0kb upstream 10000 false chr1: 30893876-30903875 Medicago truncatula
Medtr1g070205 10.0kb downstream 10.0kb downstream 11373 true chr1: 30903876-30915248 Medicago truncatula
Medtr1g070205 10.0kb downstream 10.0kb downstream 10000 false chr1: 30905249-30915248 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029797 5273 Angiosperm View MSA
122313748 5265 Fabidae View MSA
124062010 5270 Rosid View MSA
123741408 5271 Pentapetalae View MSA
122794456 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.055     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.619        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.383        
cufflinks 0.577        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.561        

0 Strain