Gene : Medtr1g070160 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13038 - APG9 AUTOPHAGY 9 Description:  autophagy 9 (APG9) protein
Genomic Order:  3717 Name:  ? Medtr1g070160
Secondary Identifier:  ? PAC:31095740
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g070160 0.5kb upstream 0.5kb upstream 7244 true chr1: 30830518-30837761 Medicago truncatula
Medtr1g070160 0.5kb upstream 0.5kb upstream 500 false chr1: 30837262-30837761 Medicago truncatula
Medtr1g070160 0.5kb downstream 0.5kb downstream 7244 true chr1: 30830018-30837261 Medicago truncatula
Medtr1g070160 0.5kb downstream 0.5kb downstream 500 false chr1: 30830018-30830517 Medicago truncatula
Medtr1g070160 1.0kb upstream 1.0kb upstream 7744 true chr1: 30830518-30838261 Medicago truncatula
Medtr1g070160 1.0kb upstream 1.0kb upstream 1000 false chr1: 30837262-30838261 Medicago truncatula
Medtr1g070160 1.0kb downstream 1.0kb downstream 7744 true chr1: 30829518-30837261 Medicago truncatula
Medtr1g070160 1.0kb downstream 1.0kb downstream 1000 false chr1: 30829518-30830517 Medicago truncatula
Medtr1g070160 2.0kb upstream 2.0kb upstream 8744 true chr1: 30830518-30839261 Medicago truncatula
Medtr1g070160 2.0kb upstream 2.0kb upstream 2000 false chr1: 30837262-30839261 Medicago truncatula
Medtr1g070160 2.0kb downstream 2.0kb downstream 8744 true chr1: 30828518-30837261 Medicago truncatula
Medtr1g070160 2.0kb downstream 2.0kb downstream 2000 false chr1: 30828518-30830517 Medicago truncatula
Medtr1g070160 5.0kb upstream 5.0kb upstream 11744 true chr1: 30830518-30842261 Medicago truncatula
Medtr1g070160 5.0kb upstream 5.0kb upstream 5000 false chr1: 30837262-30842261 Medicago truncatula
Medtr1g070160 5.0kb downstream 5.0kb downstream 11744 true chr1: 30825518-30837261 Medicago truncatula
Medtr1g070160 5.0kb downstream 5.0kb downstream 5000 false chr1: 30825518-30830517 Medicago truncatula
Medtr1g070160 10.0kb upstream 10.0kb upstream 16744 true chr1: 30830518-30847261 Medicago truncatula
Medtr1g070160 10.0kb upstream 10.0kb upstream 10000 false chr1: 30837262-30847261 Medicago truncatula
Medtr1g070160 10.0kb downstream 10.0kb downstream 16744 true chr1: 30820518-30837261 Medicago truncatula
Medtr1g070160 10.0kb downstream 10.0kb downstream 10000 false chr1: 30820518-30830517 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309851 5265 Fabidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.804        
cufflinks 3.727        
cufflinks 4.383       High
cufflinks 0.995       Low
cufflinks 4.505       High
cufflinks 1.43       Low
cufflinks 2.634        
cufflinks 3.585        
cufflinks 1.661        

0 Strain