Gene : Medtr1g072060 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR35130:SF1 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 16 Description:  mediator of RNA polymerase II transcription subunit 16
Genomic Order:  3844 Name:  ? Medtr1g072060
Secondary Identifier:  ? PAC:31099298
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g072060 0.5kb upstream 0.5kb upstream 2009 true chr1: 31949767-31951775 Medicago truncatula
Medtr1g072060 0.5kb upstream 0.5kb upstream 500 false chr1: 31951276-31951775 Medicago truncatula
Medtr1g072060 0.5kb downstream 0.5kb downstream 2009 true chr1: 31949267-31951275 Medicago truncatula
Medtr1g072060 0.5kb downstream 0.5kb downstream 500 false chr1: 31949267-31949766 Medicago truncatula
Medtr1g072060 1.0kb upstream 1.0kb upstream 2509 true chr1: 31949767-31952275 Medicago truncatula
Medtr1g072060 1.0kb upstream 1.0kb upstream 1000 false chr1: 31951276-31952275 Medicago truncatula
Medtr1g072060 1.0kb downstream 1.0kb downstream 2509 true chr1: 31948767-31951275 Medicago truncatula
Medtr1g072060 1.0kb downstream 1.0kb downstream 1000 false chr1: 31948767-31949766 Medicago truncatula
Medtr1g072060 2.0kb upstream 2.0kb upstream 3509 true chr1: 31949767-31953275 Medicago truncatula
Medtr1g072060 2.0kb upstream 2.0kb upstream 2000 false chr1: 31951276-31953275 Medicago truncatula
Medtr1g072060 2.0kb downstream 2.0kb downstream 3509 true chr1: 31947767-31951275 Medicago truncatula
Medtr1g072060 2.0kb downstream 2.0kb downstream 2000 false chr1: 31947767-31949766 Medicago truncatula
Medtr1g072060 5.0kb upstream 5.0kb upstream 6509 true chr1: 31949767-31956275 Medicago truncatula
Medtr1g072060 5.0kb upstream 5.0kb upstream 5000 false chr1: 31951276-31956275 Medicago truncatula
Medtr1g072060 5.0kb downstream 5.0kb downstream 6509 true chr1: 31944767-31951275 Medicago truncatula
Medtr1g072060 5.0kb downstream 5.0kb downstream 5000 false chr1: 31944767-31949766 Medicago truncatula
Medtr1g072060 10.0kb upstream 10.0kb upstream 11509 true chr1: 31949767-31961275 Medicago truncatula
Medtr1g072060 10.0kb upstream 10.0kb upstream 10000 false chr1: 31951276-31961275 Medicago truncatula
Medtr1g072060 10.0kb downstream 10.0kb downstream 11509 true chr1: 31939767-31951275 Medicago truncatula
Medtr1g072060 10.0kb downstream 10.0kb downstream 10000 false chr1: 31939767-31949766 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121672906 5273 Angiosperm View MSA
122271767 5265 Fabidae View MSA
124071414 5270 Rosid View MSA
123627989 5271 Pentapetalae View MSA
122662308 5272 Eudicot View MSA
120944813 5274 Embryophyte View MSA
122985224 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain