Gene : Medtr1g072580 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Description:  tudor/PWWP/MBT superfamily protein
Genomic Order:  3889 Name:  ? Medtr1g072580
Secondary Identifier:  ? PAC:31099071
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g072580 0.5kb upstream 0.5kb upstream 16346 true chr1: 32220555-32236900 Medicago truncatula
Medtr1g072580 0.5kb upstream 0.5kb upstream 500 false chr1: 32236401-32236900 Medicago truncatula
Medtr1g072580 0.5kb downstream 0.5kb downstream 16346 true chr1: 32220055-32236400 Medicago truncatula
Medtr1g072580 0.5kb downstream 0.5kb downstream 500 false chr1: 32220055-32220554 Medicago truncatula
Medtr1g072580 1.0kb upstream 1.0kb upstream 16846 true chr1: 32220555-32237400 Medicago truncatula
Medtr1g072580 1.0kb upstream 1.0kb upstream 1000 false chr1: 32236401-32237400 Medicago truncatula
Medtr1g072580 1.0kb downstream 1.0kb downstream 16846 true chr1: 32219555-32236400 Medicago truncatula
Medtr1g072580 1.0kb downstream 1.0kb downstream 1000 false chr1: 32219555-32220554 Medicago truncatula
Medtr1g072580 2.0kb upstream 2.0kb upstream 17846 true chr1: 32220555-32238400 Medicago truncatula
Medtr1g072580 2.0kb upstream 2.0kb upstream 2000 false chr1: 32236401-32238400 Medicago truncatula
Medtr1g072580 2.0kb downstream 2.0kb downstream 17846 true chr1: 32218555-32236400 Medicago truncatula
Medtr1g072580 2.0kb downstream 2.0kb downstream 2000 false chr1: 32218555-32220554 Medicago truncatula
Medtr1g072580 5.0kb upstream 5.0kb upstream 20846 true chr1: 32220555-32241400 Medicago truncatula
Medtr1g072580 5.0kb upstream 5.0kb upstream 5000 false chr1: 32236401-32241400 Medicago truncatula
Medtr1g072580 5.0kb downstream 5.0kb downstream 20846 true chr1: 32215555-32236400 Medicago truncatula
Medtr1g072580 5.0kb downstream 5.0kb downstream 5000 false chr1: 32215555-32220554 Medicago truncatula
Medtr1g072580 10.0kb upstream 10.0kb upstream 25846 true chr1: 32220555-32246400 Medicago truncatula
Medtr1g072580 10.0kb upstream 10.0kb upstream 10000 false chr1: 32236401-32246400 Medicago truncatula
Medtr1g072580 10.0kb downstream 10.0kb downstream 25846 true chr1: 32210555-32236400 Medicago truncatula
Medtr1g072580 10.0kb downstream 10.0kb downstream 10000 false chr1: 32210555-32220554 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307172 5265 Fabidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.147     High  
cufflinks 9.196        
cufflinks 12.337     High  
cufflinks 4.126       Low
cufflinks 9.859        
cufflinks 3.896       Low
cufflinks 9.445        
cufflinks 11.388     High  
cufflinks 7.079        

0 Strain