Gene : Medtr1g072630 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED Description:  legumin storage protein
Genomic Order:  3893 Name:  ? Medtr1g072630
Secondary Identifier:  ? PAC:31094699
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g072630 0.5kb upstream 0.5kb upstream 3199 true chr1: 32252524-32255722 Medicago truncatula
Medtr1g072630 0.5kb upstream 0.5kb upstream 500 false chr1: 32255223-32255722 Medicago truncatula
Medtr1g072630 0.5kb downstream 0.5kb downstream 3199 true chr1: 32252024-32255222 Medicago truncatula
Medtr1g072630 0.5kb downstream 0.5kb downstream 500 false chr1: 32252024-32252523 Medicago truncatula
Medtr1g072630 1.0kb upstream 1.0kb upstream 3699 true chr1: 32252524-32256222 Medicago truncatula
Medtr1g072630 1.0kb upstream 1.0kb upstream 1000 false chr1: 32255223-32256222 Medicago truncatula
Medtr1g072630 1.0kb downstream 1.0kb downstream 3699 true chr1: 32251524-32255222 Medicago truncatula
Medtr1g072630 1.0kb downstream 1.0kb downstream 1000 false chr1: 32251524-32252523 Medicago truncatula
Medtr1g072630 2.0kb upstream 2.0kb upstream 4699 true chr1: 32252524-32257222 Medicago truncatula
Medtr1g072630 2.0kb upstream 2.0kb upstream 2000 false chr1: 32255223-32257222 Medicago truncatula
Medtr1g072630 2.0kb downstream 2.0kb downstream 4699 true chr1: 32250524-32255222 Medicago truncatula
Medtr1g072630 2.0kb downstream 2.0kb downstream 2000 false chr1: 32250524-32252523 Medicago truncatula
Medtr1g072630 5.0kb upstream 5.0kb upstream 7699 true chr1: 32252524-32260222 Medicago truncatula
Medtr1g072630 5.0kb upstream 5.0kb upstream 5000 false chr1: 32255223-32260222 Medicago truncatula
Medtr1g072630 5.0kb downstream 5.0kb downstream 7699 true chr1: 32247524-32255222 Medicago truncatula
Medtr1g072630 5.0kb downstream 5.0kb downstream 5000 false chr1: 32247524-32252523 Medicago truncatula
Medtr1g072630 10.0kb upstream 10.0kb upstream 12699 true chr1: 32252524-32265222 Medicago truncatula
Medtr1g072630 10.0kb upstream 10.0kb upstream 10000 false chr1: 32255223-32265222 Medicago truncatula
Medtr1g072630 10.0kb downstream 10.0kb downstream 12699 true chr1: 32242524-32255222 Medicago truncatula
Medtr1g072630 10.0kb downstream 10.0kb downstream 10000 false chr1: 32242524-32252523 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313136 5265 Fabidae View MSA
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.234        
cufflinks 1.151        
cufflinks 1.268       High
cufflinks 0.078       Low
cufflinks 1.214       High
cufflinks 0.168        
cufflinks 0.091       Low
cufflinks 1.246       High
cufflinks 0.158        

0 Strain