Gene : Medtr1g080820 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22595:SF62 - HEVEIN-LIKE PREPROPROTEIN Description:  Chitinase / Hevein / PR-4 / Wheatwin2
Genomic Order:  4402 Name:  ? Medtr1g080820
Secondary Identifier:  ? PAC:31094062
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080820 0.5kb upstream 0.5kb upstream 1961 true chr1: 35952385-35954345 Medicago truncatula
Medtr1g080820 0.5kb upstream 0.5kb upstream 500 false chr1: 35953846-35954345 Medicago truncatula
Medtr1g080820 0.5kb downstream 0.5kb downstream 1961 true chr1: 35951885-35953845 Medicago truncatula
Medtr1g080820 0.5kb downstream 0.5kb downstream 500 false chr1: 35951885-35952384 Medicago truncatula
Medtr1g080820 1.0kb upstream 1.0kb upstream 2461 true chr1: 35952385-35954845 Medicago truncatula
Medtr1g080820 1.0kb upstream 1.0kb upstream 1000 false chr1: 35953846-35954845 Medicago truncatula
Medtr1g080820 1.0kb downstream 1.0kb downstream 2461 true chr1: 35951385-35953845 Medicago truncatula
Medtr1g080820 1.0kb downstream 1.0kb downstream 1000 false chr1: 35951385-35952384 Medicago truncatula
Medtr1g080820 2.0kb upstream 2.0kb upstream 3461 true chr1: 35952385-35955845 Medicago truncatula
Medtr1g080820 2.0kb upstream 2.0kb upstream 2000 false chr1: 35953846-35955845 Medicago truncatula
Medtr1g080820 2.0kb downstream 2.0kb downstream 3461 true chr1: 35950385-35953845 Medicago truncatula
Medtr1g080820 2.0kb downstream 2.0kb downstream 2000 false chr1: 35950385-35952384 Medicago truncatula
Medtr1g080820 5.0kb upstream 5.0kb upstream 6461 true chr1: 35952385-35958845 Medicago truncatula
Medtr1g080820 5.0kb upstream 5.0kb upstream 5000 false chr1: 35953846-35958845 Medicago truncatula
Medtr1g080820 5.0kb downstream 5.0kb downstream 6461 true chr1: 35947385-35953845 Medicago truncatula
Medtr1g080820 5.0kb downstream 5.0kb downstream 5000 false chr1: 35947385-35952384 Medicago truncatula
Medtr1g080820 10.0kb upstream 10.0kb upstream 11461 true chr1: 35952385-35963845 Medicago truncatula
Medtr1g080820 10.0kb upstream 10.0kb upstream 10000 false chr1: 35953846-35963845 Medicago truncatula
Medtr1g080820 10.0kb downstream 10.0kb downstream 11461 true chr1: 35942385-35953845 Medicago truncatula
Medtr1g080820 10.0kb downstream 10.0kb downstream 10000 false chr1: 35942385-35952384 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298032 5265 Fabidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.908     High High
cufflinks 9.469     High  
cufflinks 2.897        
cufflinks 0.24        
cufflinks 6.593        
cufflinks 0.493        
cufflinks 0.059     Low Low
cufflinks 2.141        
cufflinks 0.082     Low Low

0 Strain