Gene : Medtr1g080470 M. truncatula Mt4.0v1
Defline:  (1 of 1) 3.5.99.2 - Aminopyrimidine aminohydrolase / Thiaminase II Description:  heme oxygenase-like, multi-helical protein
Genomic Order:  4380 Name:  ? Medtr1g080470
Secondary Identifier:  ? PAC:31093506
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g080470 0.5kb upstream 0.5kb upstream 6766 true chr1: 35806911-35813676 Medicago truncatula
Medtr1g080470 0.5kb upstream 0.5kb upstream 500 false chr1: 35813177-35813676 Medicago truncatula
Medtr1g080470 0.5kb downstream 0.5kb downstream 6766 true chr1: 35806411-35813176 Medicago truncatula
Medtr1g080470 0.5kb downstream 0.5kb downstream 500 false chr1: 35806411-35806910 Medicago truncatula
Medtr1g080470 1.0kb upstream 1.0kb upstream 7266 true chr1: 35806911-35814176 Medicago truncatula
Medtr1g080470 1.0kb upstream 1.0kb upstream 1000 false chr1: 35813177-35814176 Medicago truncatula
Medtr1g080470 1.0kb downstream 1.0kb downstream 7266 true chr1: 35805911-35813176 Medicago truncatula
Medtr1g080470 1.0kb downstream 1.0kb downstream 1000 false chr1: 35805911-35806910 Medicago truncatula
Medtr1g080470 2.0kb upstream 2.0kb upstream 8266 true chr1: 35806911-35815176 Medicago truncatula
Medtr1g080470 2.0kb upstream 2.0kb upstream 2000 false chr1: 35813177-35815176 Medicago truncatula
Medtr1g080470 2.0kb downstream 2.0kb downstream 8266 true chr1: 35804911-35813176 Medicago truncatula
Medtr1g080470 2.0kb downstream 2.0kb downstream 2000 false chr1: 35804911-35806910 Medicago truncatula
Medtr1g080470 5.0kb upstream 5.0kb upstream 11266 true chr1: 35806911-35818176 Medicago truncatula
Medtr1g080470 5.0kb upstream 5.0kb upstream 5000 false chr1: 35813177-35818176 Medicago truncatula
Medtr1g080470 5.0kb downstream 5.0kb downstream 11266 true chr1: 35801911-35813176 Medicago truncatula
Medtr1g080470 5.0kb downstream 5.0kb downstream 5000 false chr1: 35801911-35806910 Medicago truncatula
Medtr1g080470 10.0kb upstream 10.0kb upstream 16266 true chr1: 35806911-35823176 Medicago truncatula
Medtr1g080470 10.0kb upstream 10.0kb upstream 10000 false chr1: 35813177-35823176 Medicago truncatula
Medtr1g080470 10.0kb downstream 10.0kb downstream 16266 true chr1: 35796911-35813176 Medicago truncatula
Medtr1g080470 10.0kb downstream 10.0kb downstream 10000 false chr1: 35796911-35806910 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299288 5265 Fabidae View MSA
124072840 5270 Rosid View MSA
123739887 5271 Pentapetalae View MSA
122789255 5272 Eudicot View MSA
122044712 5273 Angiosperm View MSA
121350754 5274 Embryophyte View MSA
123381877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.556        
cufflinks 1.754        
cufflinks 1.935        
cufflinks 0.964        
cufflinks 2.014        
cufflinks 0.39       Low
cufflinks 2.08        
cufflinks 1.722        
cufflinks 1.569        

0 Strain