Gene : Medtr1g082950 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR20932//PTHR20932:SF9 - LOC443603 PROTEIN-RELATED Description:  peptidoglycan-binding LysM domain protein
Genomic Order:  4522 Name:  ? Medtr1g082950
Secondary Identifier:  ? PAC:31097762
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g082950 0.5kb upstream 0.5kb upstream 2878 true chr1: 36904656-36907533 Medicago truncatula
Medtr1g082950 0.5kb upstream 0.5kb upstream 500 false chr1: 36904656-36905155 Medicago truncatula
Medtr1g082950 0.5kb downstream 0.5kb downstream 2878 true chr1: 36905156-36908033 Medicago truncatula
Medtr1g082950 0.5kb downstream 0.5kb downstream 500 false chr1: 36907534-36908033 Medicago truncatula
Medtr1g082950 1.0kb upstream 1.0kb upstream 3378 true chr1: 36904156-36907533 Medicago truncatula
Medtr1g082950 1.0kb upstream 1.0kb upstream 1000 false chr1: 36904156-36905155 Medicago truncatula
Medtr1g082950 1.0kb downstream 1.0kb downstream 3378 true chr1: 36905156-36908533 Medicago truncatula
Medtr1g082950 1.0kb downstream 1.0kb downstream 1000 false chr1: 36907534-36908533 Medicago truncatula
Medtr1g082950 2.0kb upstream 2.0kb upstream 4378 true chr1: 36903156-36907533 Medicago truncatula
Medtr1g082950 2.0kb upstream 2.0kb upstream 2000 false chr1: 36903156-36905155 Medicago truncatula
Medtr1g082950 2.0kb downstream 2.0kb downstream 4378 true chr1: 36905156-36909533 Medicago truncatula
Medtr1g082950 2.0kb downstream 2.0kb downstream 2000 false chr1: 36907534-36909533 Medicago truncatula
Medtr1g082950 5.0kb upstream 5.0kb upstream 7378 true chr1: 36900156-36907533 Medicago truncatula
Medtr1g082950 5.0kb upstream 5.0kb upstream 5000 false chr1: 36900156-36905155 Medicago truncatula
Medtr1g082950 5.0kb downstream 5.0kb downstream 7378 true chr1: 36905156-36912533 Medicago truncatula
Medtr1g082950 5.0kb downstream 5.0kb downstream 5000 false chr1: 36907534-36912533 Medicago truncatula
Medtr1g082950 10.0kb upstream 10.0kb upstream 12378 true chr1: 36895156-36907533 Medicago truncatula
Medtr1g082950 10.0kb upstream 10.0kb upstream 10000 false chr1: 36895156-36905155 Medicago truncatula
Medtr1g082950 10.0kb downstream 10.0kb downstream 12378 true chr1: 36905156-36917533 Medicago truncatula
Medtr1g082950 10.0kb downstream 10.0kb downstream 10000 false chr1: 36907534-36917533 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301739 5265 Fabidae View MSA
124067159 5270 Rosid View MSA
123748908 5271 Pentapetalae View MSA
122796552 5272 Eudicot View MSA
122043653 5273 Angiosperm View MSA
121310161 5274 Embryophyte View MSA
123425497 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.62       Low
cufflinks 9.231        
cufflinks 13.604     High High
cufflinks 9.943     High  
cufflinks 11.876     High  
cufflinks 8.19       Low
cufflinks 12.733     High High
cufflinks 11.279     High  
cufflinks 10.861     High  

0 Strain