Gene : Medtr1g083380 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Description:  translationally-controlled tumor-like protein
Genomic Order:  4549 Name:  ? Medtr1g083380
Secondary Identifier:  ? PAC:31096907
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083380 0.5kb upstream 0.5kb upstream 2277 true chr1: 37105077-37107353 Medicago truncatula
Medtr1g083380 0.5kb upstream 0.5kb upstream 500 false chr1: 37106854-37107353 Medicago truncatula
Medtr1g083380 0.5kb downstream 0.5kb downstream 2277 true chr1: 37104577-37106853 Medicago truncatula
Medtr1g083380 0.5kb downstream 0.5kb downstream 500 false chr1: 37104577-37105076 Medicago truncatula
Medtr1g083380 1.0kb upstream 1.0kb upstream 2777 true chr1: 37105077-37107853 Medicago truncatula
Medtr1g083380 1.0kb upstream 1.0kb upstream 1000 false chr1: 37106854-37107853 Medicago truncatula
Medtr1g083380 1.0kb downstream 1.0kb downstream 2777 true chr1: 37104077-37106853 Medicago truncatula
Medtr1g083380 1.0kb downstream 1.0kb downstream 1000 false chr1: 37104077-37105076 Medicago truncatula
Medtr1g083380 2.0kb upstream 2.0kb upstream 3777 true chr1: 37105077-37108853 Medicago truncatula
Medtr1g083380 2.0kb upstream 2.0kb upstream 2000 false chr1: 37106854-37108853 Medicago truncatula
Medtr1g083380 2.0kb downstream 2.0kb downstream 3777 true chr1: 37103077-37106853 Medicago truncatula
Medtr1g083380 2.0kb downstream 2.0kb downstream 2000 false chr1: 37103077-37105076 Medicago truncatula
Medtr1g083380 5.0kb upstream 5.0kb upstream 6777 true chr1: 37105077-37111853 Medicago truncatula
Medtr1g083380 5.0kb upstream 5.0kb upstream 5000 false chr1: 37106854-37111853 Medicago truncatula
Medtr1g083380 5.0kb downstream 5.0kb downstream 6777 true chr1: 37100077-37106853 Medicago truncatula
Medtr1g083380 5.0kb downstream 5.0kb downstream 5000 false chr1: 37100077-37105076 Medicago truncatula
Medtr1g083380 10.0kb upstream 10.0kb upstream 11777 true chr1: 37105077-37116853 Medicago truncatula
Medtr1g083380 10.0kb upstream 10.0kb upstream 10000 false chr1: 37106854-37116853 Medicago truncatula
Medtr1g083380 10.0kb downstream 10.0kb downstream 11777 true chr1: 37095077-37106853 Medicago truncatula
Medtr1g083380 10.0kb downstream 10.0kb downstream 10000 false chr1: 37095077-37105076 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303382 5265 Fabidae View MSA
124072412 5270 Rosid View MSA
123743771 5271 Pentapetalae View MSA
122796056 5272 Eudicot View MSA
122046002 5273 Angiosperm View MSA
121343936 5274 Embryophyte View MSA
123424738 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.425     High High
cufflinks 9.878     High  
cufflinks 14.633     High  
cufflinks 10.479     High  
cufflinks 13.188     High  
cufflinks 13.456     High  
cufflinks 15.756     High  
cufflinks 11.899     High  
cufflinks 10.538     High  

0 Strain