Gene : Medtr1g083020 M. truncatula Mt4.0v1
Defline:  (1 of 27) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Description:  linoleate 9S-lipoxygenase-like protein
Genomic Order:  4523 Name:  ? Medtr1g083020
Secondary Identifier:  ? PAC:31097477
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083020 0.5kb upstream 0.5kb upstream 6960 true chr1: 36920155-36927114 Medicago truncatula
Medtr1g083020 0.5kb upstream 0.5kb upstream 500 false chr1: 36920155-36920654 Medicago truncatula
Medtr1g083020 0.5kb downstream 0.5kb downstream 6960 true chr1: 36920655-36927614 Medicago truncatula
Medtr1g083020 0.5kb downstream 0.5kb downstream 500 false chr1: 36927115-36927614 Medicago truncatula
Medtr1g083020 1.0kb upstream 1.0kb upstream 7460 true chr1: 36919655-36927114 Medicago truncatula
Medtr1g083020 1.0kb upstream 1.0kb upstream 1000 false chr1: 36919655-36920654 Medicago truncatula
Medtr1g083020 1.0kb downstream 1.0kb downstream 7460 true chr1: 36920655-36928114 Medicago truncatula
Medtr1g083020 1.0kb downstream 1.0kb downstream 1000 false chr1: 36927115-36928114 Medicago truncatula
Medtr1g083020 2.0kb upstream 2.0kb upstream 8460 true chr1: 36918655-36927114 Medicago truncatula
Medtr1g083020 2.0kb upstream 2.0kb upstream 2000 false chr1: 36918655-36920654 Medicago truncatula
Medtr1g083020 2.0kb downstream 2.0kb downstream 8460 true chr1: 36920655-36929114 Medicago truncatula
Medtr1g083020 2.0kb downstream 2.0kb downstream 2000 false chr1: 36927115-36929114 Medicago truncatula
Medtr1g083020 5.0kb upstream 5.0kb upstream 11460 true chr1: 36915655-36927114 Medicago truncatula
Medtr1g083020 5.0kb upstream 5.0kb upstream 5000 false chr1: 36915655-36920654 Medicago truncatula
Medtr1g083020 5.0kb downstream 5.0kb downstream 11460 true chr1: 36920655-36932114 Medicago truncatula
Medtr1g083020 5.0kb downstream 5.0kb downstream 5000 false chr1: 36927115-36932114 Medicago truncatula
Medtr1g083020 10.0kb upstream 10.0kb upstream 16460 true chr1: 36910655-36927114 Medicago truncatula
Medtr1g083020 10.0kb upstream 10.0kb upstream 10000 false chr1: 36910655-36920654 Medicago truncatula
Medtr1g083020 10.0kb downstream 10.0kb downstream 16460 true chr1: 36920655-36937114 Medicago truncatula
Medtr1g083020 10.0kb downstream 10.0kb downstream 10000 false chr1: 36927115-36937114 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
122297154 5265 Fabidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.924        
cufflinks 4.108        
cufflinks 4.393        
cufflinks 1.427        
cufflinks 4.903       High
cufflinks 0.296       Low
cufflinks 0.745        
cufflinks 4.689        
cufflinks 1.047        

0 Strain