Gene : Medtr1g084030 M. truncatula Mt4.0v1
Defline:  (1 of 8) 3.4.21.53 - Endopeptidase La / ATP-dependent serine proteinase Description:  Lon protease-like protein
Genomic Order:  4604 Name:  ? Medtr1g084030
Secondary Identifier:  ? PAC:31092605
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g084030 0.5kb upstream 0.5kb upstream 5562 true chr1: 37468860-37474421 Medicago truncatula
Medtr1g084030 0.5kb upstream 0.5kb upstream 500 false chr1: 37473922-37474421 Medicago truncatula
Medtr1g084030 0.5kb downstream 0.5kb downstream 5562 true chr1: 37468360-37473921 Medicago truncatula
Medtr1g084030 0.5kb downstream 0.5kb downstream 500 false chr1: 37468360-37468859 Medicago truncatula
Medtr1g084030 1.0kb upstream 1.0kb upstream 6062 true chr1: 37468860-37474921 Medicago truncatula
Medtr1g084030 1.0kb upstream 1.0kb upstream 1000 false chr1: 37473922-37474921 Medicago truncatula
Medtr1g084030 1.0kb downstream 1.0kb downstream 6062 true chr1: 37467860-37473921 Medicago truncatula
Medtr1g084030 1.0kb downstream 1.0kb downstream 1000 false chr1: 37467860-37468859 Medicago truncatula
Medtr1g084030 2.0kb upstream 2.0kb upstream 7062 true chr1: 37468860-37475921 Medicago truncatula
Medtr1g084030 2.0kb upstream 2.0kb upstream 2000 false chr1: 37473922-37475921 Medicago truncatula
Medtr1g084030 2.0kb downstream 2.0kb downstream 7062 true chr1: 37466860-37473921 Medicago truncatula
Medtr1g084030 2.0kb downstream 2.0kb downstream 2000 false chr1: 37466860-37468859 Medicago truncatula
Medtr1g084030 5.0kb upstream 5.0kb upstream 10062 true chr1: 37468860-37478921 Medicago truncatula
Medtr1g084030 5.0kb upstream 5.0kb upstream 5000 false chr1: 37473922-37478921 Medicago truncatula
Medtr1g084030 5.0kb downstream 5.0kb downstream 10062 true chr1: 37463860-37473921 Medicago truncatula
Medtr1g084030 5.0kb downstream 5.0kb downstream 5000 false chr1: 37463860-37468859 Medicago truncatula
Medtr1g084030 10.0kb upstream 10.0kb upstream 15062 true chr1: 37468860-37483921 Medicago truncatula
Medtr1g084030 10.0kb upstream 10.0kb upstream 10000 false chr1: 37473922-37483921 Medicago truncatula
Medtr1g084030 10.0kb downstream 10.0kb downstream 15062 true chr1: 37458860-37473921 Medicago truncatula
Medtr1g084030 10.0kb downstream 10.0kb downstream 10000 false chr1: 37458860-37468859 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657497 5273 Angiosperm View MSA
122255558 5265 Fabidae Singleton cluster - no MSA
124039403 5270 Rosid View MSA
123611300 5271 Pentapetalae View MSA
122645871 5272 Eudicot View MSA
120929538 5274 Embryophyte View MSA
122970096 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low  
cufflinks 0.009     Low Low
cufflinks 0.01     Low Low
cufflinks 0.024     Low  
cufflinks 0.057     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.028     Low  
cufflinks 0.06     Low High

0 Strain