Gene : Medtr1g083700 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Description:  topless-like protein
Genomic Order:  4573 Name:  ? Medtr1g083700
Secondary Identifier:  ? PAC:31095429
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083700 0.5kb upstream 0.5kb upstream 10503 true chr1: 37248075-37258577 Medicago truncatula
Medtr1g083700 0.5kb upstream 0.5kb upstream 500 false chr1: 37248075-37248574 Medicago truncatula
Medtr1g083700 0.5kb downstream 0.5kb downstream 10503 true chr1: 37248575-37259077 Medicago truncatula
Medtr1g083700 0.5kb downstream 0.5kb downstream 500 false chr1: 37258578-37259077 Medicago truncatula
Medtr1g083700 1.0kb upstream 1.0kb upstream 11003 true chr1: 37247575-37258577 Medicago truncatula
Medtr1g083700 1.0kb upstream 1.0kb upstream 1000 false chr1: 37247575-37248574 Medicago truncatula
Medtr1g083700 1.0kb downstream 1.0kb downstream 11003 true chr1: 37248575-37259577 Medicago truncatula
Medtr1g083700 1.0kb downstream 1.0kb downstream 1000 false chr1: 37258578-37259577 Medicago truncatula
Medtr1g083700 2.0kb upstream 2.0kb upstream 12003 true chr1: 37246575-37258577 Medicago truncatula
Medtr1g083700 2.0kb upstream 2.0kb upstream 2000 false chr1: 37246575-37248574 Medicago truncatula
Medtr1g083700 2.0kb downstream 2.0kb downstream 12003 true chr1: 37248575-37260577 Medicago truncatula
Medtr1g083700 2.0kb downstream 2.0kb downstream 2000 false chr1: 37258578-37260577 Medicago truncatula
Medtr1g083700 5.0kb upstream 5.0kb upstream 15003 true chr1: 37243575-37258577 Medicago truncatula
Medtr1g083700 5.0kb upstream 5.0kb upstream 5000 false chr1: 37243575-37248574 Medicago truncatula
Medtr1g083700 5.0kb downstream 5.0kb downstream 15003 true chr1: 37248575-37263577 Medicago truncatula
Medtr1g083700 5.0kb downstream 5.0kb downstream 5000 false chr1: 37258578-37263577 Medicago truncatula
Medtr1g083700 10.0kb upstream 10.0kb upstream 20003 true chr1: 37238575-37258577 Medicago truncatula
Medtr1g083700 10.0kb upstream 10.0kb upstream 10000 false chr1: 37238575-37248574 Medicago truncatula
Medtr1g083700 10.0kb downstream 10.0kb downstream 20003 true chr1: 37248575-37268577 Medicago truncatula
Medtr1g083700 10.0kb downstream 10.0kb downstream 10000 false chr1: 37258578-37268577 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026551 5273 Angiosperm View MSA
122313709 5265 Fabidae View MSA
124065590 5270 Rosid View MSA
123741306 5271 Pentapetalae View MSA
122793057 5272 Eudicot View MSA
121296383 5274 Embryophyte View MSA
123334555 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.196     High  
cufflinks 15.899     High  
cufflinks 11.436     High  
cufflinks 8.009        
cufflinks 15.995     High High
cufflinks 4.052       Low
cufflinks 11.638     High  
cufflinks 10.824     High  
cufflinks 11.871     High  

0 Strain