Gene : Medtr1g085130 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11081:SF9 - FLAP ENDONUCLEASE 1 Description:  flap endonuclease 1-A
Genomic Order:  4669 Name:  ? Medtr1g085130
Secondary Identifier:  ? PAC:31096344
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g085130 0.5kb upstream 0.5kb upstream 8173 true chr1: 38000445-38008617 Medicago truncatula
Medtr1g085130 0.5kb upstream 0.5kb upstream 500 false chr1: 38000445-38000944 Medicago truncatula
Medtr1g085130 0.5kb downstream 0.5kb downstream 8173 true chr1: 38000945-38009117 Medicago truncatula
Medtr1g085130 0.5kb downstream 0.5kb downstream 500 false chr1: 38008618-38009117 Medicago truncatula
Medtr1g085130 1.0kb upstream 1.0kb upstream 8673 true chr1: 37999945-38008617 Medicago truncatula
Medtr1g085130 1.0kb upstream 1.0kb upstream 1000 false chr1: 37999945-38000944 Medicago truncatula
Medtr1g085130 1.0kb downstream 1.0kb downstream 8673 true chr1: 38000945-38009617 Medicago truncatula
Medtr1g085130 1.0kb downstream 1.0kb downstream 1000 false chr1: 38008618-38009617 Medicago truncatula
Medtr1g085130 2.0kb upstream 2.0kb upstream 9673 true chr1: 37998945-38008617 Medicago truncatula
Medtr1g085130 2.0kb upstream 2.0kb upstream 2000 false chr1: 37998945-38000944 Medicago truncatula
Medtr1g085130 2.0kb downstream 2.0kb downstream 9673 true chr1: 38000945-38010617 Medicago truncatula
Medtr1g085130 2.0kb downstream 2.0kb downstream 2000 false chr1: 38008618-38010617 Medicago truncatula
Medtr1g085130 5.0kb upstream 5.0kb upstream 12673 true chr1: 37995945-38008617 Medicago truncatula
Medtr1g085130 5.0kb upstream 5.0kb upstream 5000 false chr1: 37995945-38000944 Medicago truncatula
Medtr1g085130 5.0kb downstream 5.0kb downstream 12673 true chr1: 38000945-38013617 Medicago truncatula
Medtr1g085130 5.0kb downstream 5.0kb downstream 5000 false chr1: 38008618-38013617 Medicago truncatula
Medtr1g085130 10.0kb upstream 10.0kb upstream 17673 true chr1: 37990945-38008617 Medicago truncatula
Medtr1g085130 10.0kb upstream 10.0kb upstream 10000 false chr1: 37990945-38000944 Medicago truncatula
Medtr1g085130 10.0kb downstream 10.0kb downstream 17673 true chr1: 38000945-38018617 Medicago truncatula
Medtr1g085130 10.0kb downstream 10.0kb downstream 10000 false chr1: 38008618-38018617 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300730 5265 Fabidae View MSA
124061895 5270 Rosid View MSA
123737846 5271 Pentapetalae View MSA
122788743 5272 Eudicot View MSA
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.681        
cufflinks 0.47        
cufflinks 0.479        
cufflinks 0.157       Low
cufflinks 0.776       High
cufflinks 0.148       Low
cufflinks 0.534        
cufflinks 0.445        
cufflinks 0.438        

0 Strain