Gene : Medtr1g086330 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  4748
Name:  ? Medtr1g086330 Secondary Identifier:  ? PAC:31095082
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g086330 0.5kb upstream 0.5kb upstream 2275 true chr1: 38630078-38632352 Medicago truncatula
Medtr1g086330 0.5kb upstream 0.5kb upstream 500 false chr1: 38631853-38632352 Medicago truncatula
Medtr1g086330 0.5kb downstream 0.5kb downstream 2275 true chr1: 38629578-38631852 Medicago truncatula
Medtr1g086330 0.5kb downstream 0.5kb downstream 500 false chr1: 38629578-38630077 Medicago truncatula
Medtr1g086330 1.0kb upstream 1.0kb upstream 2775 true chr1: 38630078-38632852 Medicago truncatula
Medtr1g086330 1.0kb upstream 1.0kb upstream 1000 false chr1: 38631853-38632852 Medicago truncatula
Medtr1g086330 1.0kb downstream 1.0kb downstream 2775 true chr1: 38629078-38631852 Medicago truncatula
Medtr1g086330 1.0kb downstream 1.0kb downstream 1000 false chr1: 38629078-38630077 Medicago truncatula
Medtr1g086330 2.0kb upstream 2.0kb upstream 3775 true chr1: 38630078-38633852 Medicago truncatula
Medtr1g086330 2.0kb upstream 2.0kb upstream 2000 false chr1: 38631853-38633852 Medicago truncatula
Medtr1g086330 2.0kb downstream 2.0kb downstream 3775 true chr1: 38628078-38631852 Medicago truncatula
Medtr1g086330 2.0kb downstream 2.0kb downstream 2000 false chr1: 38628078-38630077 Medicago truncatula
Medtr1g086330 5.0kb upstream 5.0kb upstream 6775 true chr1: 38630078-38636852 Medicago truncatula
Medtr1g086330 5.0kb upstream 5.0kb upstream 5000 false chr1: 38631853-38636852 Medicago truncatula
Medtr1g086330 5.0kb downstream 5.0kb downstream 6775 true chr1: 38625078-38631852 Medicago truncatula
Medtr1g086330 5.0kb downstream 5.0kb downstream 5000 false chr1: 38625078-38630077 Medicago truncatula
Medtr1g086330 10.0kb upstream 10.0kb upstream 11775 true chr1: 38630078-38641852 Medicago truncatula
Medtr1g086330 10.0kb upstream 10.0kb upstream 10000 false chr1: 38631853-38641852 Medicago truncatula
Medtr1g086330 10.0kb downstream 10.0kb downstream 11775 true chr1: 38620078-38631852 Medicago truncatula
Medtr1g086330 10.0kb downstream 10.0kb downstream 10000 false chr1: 38620078-38630077 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310053 5265 Fabidae View MSA
124069356 5270 Rosid View MSA
123742028 5271 Pentapetalae View MSA
122795561 5272 Eudicot View MSA
122048259 5273 Angiosperm View MSA
121350549 5274 Embryophyte View MSA
123427576 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low Low
cufflinks 0.044     Low  
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain