Gene : Medtr1g086050 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM Description:  preprotein translocase subunit SecA
Genomic Order:  4730 Name:  ? Medtr1g086050
Secondary Identifier:  ? PAC:31100387
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g086050 0.5kb upstream 0.5kb upstream 12778 true chr1: 38492763-38505540 Medicago truncatula
Medtr1g086050 0.5kb upstream 0.5kb upstream 500 false chr1: 38505041-38505540 Medicago truncatula
Medtr1g086050 0.5kb downstream 0.5kb downstream 12778 true chr1: 38492263-38505040 Medicago truncatula
Medtr1g086050 0.5kb downstream 0.5kb downstream 500 false chr1: 38492263-38492762 Medicago truncatula
Medtr1g086050 1.0kb upstream 1.0kb upstream 13278 true chr1: 38492763-38506040 Medicago truncatula
Medtr1g086050 1.0kb upstream 1.0kb upstream 1000 false chr1: 38505041-38506040 Medicago truncatula
Medtr1g086050 1.0kb downstream 1.0kb downstream 13278 true chr1: 38491763-38505040 Medicago truncatula
Medtr1g086050 1.0kb downstream 1.0kb downstream 1000 false chr1: 38491763-38492762 Medicago truncatula
Medtr1g086050 2.0kb upstream 2.0kb upstream 14278 true chr1: 38492763-38507040 Medicago truncatula
Medtr1g086050 2.0kb upstream 2.0kb upstream 2000 false chr1: 38505041-38507040 Medicago truncatula
Medtr1g086050 2.0kb downstream 2.0kb downstream 14278 true chr1: 38490763-38505040 Medicago truncatula
Medtr1g086050 2.0kb downstream 2.0kb downstream 2000 false chr1: 38490763-38492762 Medicago truncatula
Medtr1g086050 5.0kb upstream 5.0kb upstream 17278 true chr1: 38492763-38510040 Medicago truncatula
Medtr1g086050 5.0kb upstream 5.0kb upstream 5000 false chr1: 38505041-38510040 Medicago truncatula
Medtr1g086050 5.0kb downstream 5.0kb downstream 17278 true chr1: 38487763-38505040 Medicago truncatula
Medtr1g086050 5.0kb downstream 5.0kb downstream 5000 false chr1: 38487763-38492762 Medicago truncatula
Medtr1g086050 10.0kb upstream 10.0kb upstream 22278 true chr1: 38492763-38515040 Medicago truncatula
Medtr1g086050 10.0kb upstream 10.0kb upstream 10000 false chr1: 38505041-38515040 Medicago truncatula
Medtr1g086050 10.0kb downstream 10.0kb downstream 22278 true chr1: 38482763-38505040 Medicago truncatula
Medtr1g086050 10.0kb downstream 10.0kb downstream 10000 false chr1: 38482763-38492762 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309519 5265 Fabidae View MSA
124067492 5270 Rosid View MSA
123740591 5271 Pentapetalae View MSA
122790576 5272 Eudicot View MSA
122047276 5273 Angiosperm View MSA
121346470 5274 Embryophyte View MSA
123428614 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.691        
cufflinks 18.843     High  
cufflinks 27.074     High High
cufflinks 0.877       Low
cufflinks 18.545     High  
cufflinks 1.288        
cufflinks 2.337        
cufflinks 22.276     High High
cufflinks 1.199       Low

0 Strain