Gene : Medtr1g064230 M. truncatula Mt4.0v1
Defline:  (1 of 20) KOG0131 - Splicing factor 3b, subunit 4 Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  3399 Name:  ? Medtr1g064230
Secondary Identifier:  ? PAC:31099586
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g064230 0.5kb upstream 0.5kb upstream 2347 true chr1: 28254235-28256581 Medicago truncatula
Medtr1g064230 0.5kb upstream 0.5kb upstream 500 false chr1: 28254235-28254734 Medicago truncatula
Medtr1g064230 0.5kb downstream 0.5kb downstream 2347 true chr1: 28254735-28257081 Medicago truncatula
Medtr1g064230 0.5kb downstream 0.5kb downstream 500 false chr1: 28256582-28257081 Medicago truncatula
Medtr1g064230 1.0kb upstream 1.0kb upstream 2847 true chr1: 28253735-28256581 Medicago truncatula
Medtr1g064230 1.0kb upstream 1.0kb upstream 1000 false chr1: 28253735-28254734 Medicago truncatula
Medtr1g064230 1.0kb downstream 1.0kb downstream 2847 true chr1: 28254735-28257581 Medicago truncatula
Medtr1g064230 1.0kb downstream 1.0kb downstream 1000 false chr1: 28256582-28257581 Medicago truncatula
Medtr1g064230 2.0kb upstream 2.0kb upstream 3847 true chr1: 28252735-28256581 Medicago truncatula
Medtr1g064230 2.0kb upstream 2.0kb upstream 2000 false chr1: 28252735-28254734 Medicago truncatula
Medtr1g064230 2.0kb downstream 2.0kb downstream 3847 true chr1: 28254735-28258581 Medicago truncatula
Medtr1g064230 2.0kb downstream 2.0kb downstream 2000 false chr1: 28256582-28258581 Medicago truncatula
Medtr1g064230 5.0kb upstream 5.0kb upstream 6847 true chr1: 28249735-28256581 Medicago truncatula
Medtr1g064230 5.0kb upstream 5.0kb upstream 5000 false chr1: 28249735-28254734 Medicago truncatula
Medtr1g064230 5.0kb downstream 5.0kb downstream 6847 true chr1: 28254735-28261581 Medicago truncatula
Medtr1g064230 5.0kb downstream 5.0kb downstream 5000 false chr1: 28256582-28261581 Medicago truncatula
Medtr1g064230 10.0kb upstream 10.0kb upstream 11847 true chr1: 28244735-28256581 Medicago truncatula
Medtr1g064230 10.0kb upstream 10.0kb upstream 10000 false chr1: 28244735-28254734 Medicago truncatula
Medtr1g064230 10.0kb downstream 10.0kb downstream 11847 true chr1: 28254735-28266581 Medicago truncatula
Medtr1g064230 10.0kb downstream 10.0kb downstream 10000 false chr1: 28256582-28266581 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
122300715 5265 Fabidae View MSA
124066117 5270 Rosid View MSA
123752208 5271 Pentapetalae View MSA
122797685 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.206     High  
cufflinks 75.18     High  
cufflinks 154.72     High High
cufflinks 13.225     High  
cufflinks 259.04     High High
cufflinks 4.704       Low
cufflinks 6.09       Low
cufflinks 139.144     High  
cufflinks 9.957        

0 Strain