Gene : Medtr1g078290 M. truncatula Mt4.0v1
Defline:  (1 of 11) PF05212 - Protein of unknown function (DUF707) (DUF707) Description:  lysine ketoglutarate reductase trans-splicing-like protein
Genomic Order:  4268 Name:  ? Medtr1g078290
Secondary Identifier:  ? PAC:31096070
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g078290 0.5kb upstream 0.5kb upstream 4657 true chr1: 35044858-35049514 Medicago truncatula
Medtr1g078290 0.5kb upstream 0.5kb upstream 500 false chr1: 35049015-35049514 Medicago truncatula
Medtr1g078290 0.5kb downstream 0.5kb downstream 4657 true chr1: 35044358-35049014 Medicago truncatula
Medtr1g078290 0.5kb downstream 0.5kb downstream 500 false chr1: 35044358-35044857 Medicago truncatula
Medtr1g078290 1.0kb upstream 1.0kb upstream 5157 true chr1: 35044858-35050014 Medicago truncatula
Medtr1g078290 1.0kb upstream 1.0kb upstream 1000 false chr1: 35049015-35050014 Medicago truncatula
Medtr1g078290 1.0kb downstream 1.0kb downstream 5157 true chr1: 35043858-35049014 Medicago truncatula
Medtr1g078290 1.0kb downstream 1.0kb downstream 1000 false chr1: 35043858-35044857 Medicago truncatula
Medtr1g078290 2.0kb upstream 2.0kb upstream 6157 true chr1: 35044858-35051014 Medicago truncatula
Medtr1g078290 2.0kb upstream 2.0kb upstream 2000 false chr1: 35049015-35051014 Medicago truncatula
Medtr1g078290 2.0kb downstream 2.0kb downstream 6157 true chr1: 35042858-35049014 Medicago truncatula
Medtr1g078290 2.0kb downstream 2.0kb downstream 2000 false chr1: 35042858-35044857 Medicago truncatula
Medtr1g078290 5.0kb upstream 5.0kb upstream 9157 true chr1: 35044858-35054014 Medicago truncatula
Medtr1g078290 5.0kb upstream 5.0kb upstream 5000 false chr1: 35049015-35054014 Medicago truncatula
Medtr1g078290 5.0kb downstream 5.0kb downstream 9157 true chr1: 35039858-35049014 Medicago truncatula
Medtr1g078290 5.0kb downstream 5.0kb downstream 5000 false chr1: 35039858-35044857 Medicago truncatula
Medtr1g078290 10.0kb upstream 10.0kb upstream 14157 true chr1: 35044858-35059014 Medicago truncatula
Medtr1g078290 10.0kb upstream 10.0kb upstream 10000 false chr1: 35049015-35059014 Medicago truncatula
Medtr1g078290 10.0kb downstream 10.0kb downstream 14157 true chr1: 35034858-35049014 Medicago truncatula
Medtr1g078290 10.0kb downstream 10.0kb downstream 10000 false chr1: 35034858-35044857 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309457 5265 Fabidae View MSA
124070271 5270 Rosid View MSA
123749470 5271 Pentapetalae View MSA
122796901 5272 Eudicot View MSA
122044629 5273 Angiosperm View MSA
121349221 5274 Embryophyte View MSA
123381221 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.86       High
cufflinks 0.015     Low  
cufflinks 0.013     Low Low
cufflinks 0.435        
cufflinks 0.02     Low  
cufflinks 0.316        
cufflinks 1.061        
cufflinks 0.008     Low Low
cufflinks 0.853        

0 Strain