Gene : Medtr1g079430 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR27001:SF100 - PROTEIN KINASE FAMILY PROTEIN Description:  Serine/Threonine-kinase PBS1-like protein
Genomic Order:  4310 Name:  ? Medtr1g079430
Secondary Identifier:  ? PAC:31095149
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g079430 0.5kb upstream 0.5kb upstream 4109 true chr1: 35285420-35289528 Medicago truncatula
Medtr1g079430 0.5kb upstream 0.5kb upstream 500 false chr1: 35285420-35285919 Medicago truncatula
Medtr1g079430 0.5kb downstream 0.5kb downstream 4109 true chr1: 35285920-35290028 Medicago truncatula
Medtr1g079430 0.5kb downstream 0.5kb downstream 500 false chr1: 35289529-35290028 Medicago truncatula
Medtr1g079430 1.0kb upstream 1.0kb upstream 4609 true chr1: 35284920-35289528 Medicago truncatula
Medtr1g079430 1.0kb upstream 1.0kb upstream 1000 false chr1: 35284920-35285919 Medicago truncatula
Medtr1g079430 1.0kb downstream 1.0kb downstream 4609 true chr1: 35285920-35290528 Medicago truncatula
Medtr1g079430 1.0kb downstream 1.0kb downstream 1000 false chr1: 35289529-35290528 Medicago truncatula
Medtr1g079430 2.0kb upstream 2.0kb upstream 5609 true chr1: 35283920-35289528 Medicago truncatula
Medtr1g079430 2.0kb upstream 2.0kb upstream 2000 false chr1: 35283920-35285919 Medicago truncatula
Medtr1g079430 2.0kb downstream 2.0kb downstream 5609 true chr1: 35285920-35291528 Medicago truncatula
Medtr1g079430 2.0kb downstream 2.0kb downstream 2000 false chr1: 35289529-35291528 Medicago truncatula
Medtr1g079430 5.0kb upstream 5.0kb upstream 8609 true chr1: 35280920-35289528 Medicago truncatula
Medtr1g079430 5.0kb upstream 5.0kb upstream 5000 false chr1: 35280920-35285919 Medicago truncatula
Medtr1g079430 5.0kb downstream 5.0kb downstream 8609 true chr1: 35285920-35294528 Medicago truncatula
Medtr1g079430 5.0kb downstream 5.0kb downstream 5000 false chr1: 35289529-35294528 Medicago truncatula
Medtr1g079430 10.0kb upstream 10.0kb upstream 13609 true chr1: 35275920-35289528 Medicago truncatula
Medtr1g079430 10.0kb upstream 10.0kb upstream 10000 false chr1: 35275920-35285919 Medicago truncatula
Medtr1g079430 10.0kb downstream 10.0kb downstream 13609 true chr1: 35285920-35299528 Medicago truncatula
Medtr1g079430 10.0kb downstream 10.0kb downstream 10000 false chr1: 35289529-35299528 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029673 5273 Angiosperm View MSA
122309563 5265 Fabidae View MSA
124072230 5270 Rosid View MSA
123746804 5271 Pentapetalae View MSA
122772037 5272 Eudicot View MSA
121298975 5274 Embryophyte View MSA
123336907 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low  
cufflinks 0.72        
cufflinks 0.955        
cufflinks 0.003     Low Low
cufflinks 1.222        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.869        
cufflinks 0.03     Low  

0 Strain