Gene : Medtr1g079470 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21402:SF10 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN Description:  hypothetical protein
Genomic Order:  4315 Name:  ? Medtr1g079470
Secondary Identifier:  ? PAC:31099231
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g079470 0.5kb upstream 0.5kb upstream 4009 true chr1: 35299574-35303582 Medicago truncatula
Medtr1g079470 0.5kb upstream 0.5kb upstream 500 false chr1: 35303083-35303582 Medicago truncatula
Medtr1g079470 0.5kb downstream 0.5kb downstream 4009 true chr1: 35299074-35303082 Medicago truncatula
Medtr1g079470 0.5kb downstream 0.5kb downstream 500 false chr1: 35299074-35299573 Medicago truncatula
Medtr1g079470 1.0kb upstream 1.0kb upstream 4509 true chr1: 35299574-35304082 Medicago truncatula
Medtr1g079470 1.0kb upstream 1.0kb upstream 1000 false chr1: 35303083-35304082 Medicago truncatula
Medtr1g079470 1.0kb downstream 1.0kb downstream 4509 true chr1: 35298574-35303082 Medicago truncatula
Medtr1g079470 1.0kb downstream 1.0kb downstream 1000 false chr1: 35298574-35299573 Medicago truncatula
Medtr1g079470 2.0kb upstream 2.0kb upstream 5509 true chr1: 35299574-35305082 Medicago truncatula
Medtr1g079470 2.0kb upstream 2.0kb upstream 2000 false chr1: 35303083-35305082 Medicago truncatula
Medtr1g079470 2.0kb downstream 2.0kb downstream 5509 true chr1: 35297574-35303082 Medicago truncatula
Medtr1g079470 2.0kb downstream 2.0kb downstream 2000 false chr1: 35297574-35299573 Medicago truncatula
Medtr1g079470 5.0kb upstream 5.0kb upstream 8509 true chr1: 35299574-35308082 Medicago truncatula
Medtr1g079470 5.0kb upstream 5.0kb upstream 5000 false chr1: 35303083-35308082 Medicago truncatula
Medtr1g079470 5.0kb downstream 5.0kb downstream 8509 true chr1: 35294574-35303082 Medicago truncatula
Medtr1g079470 5.0kb downstream 5.0kb downstream 5000 false chr1: 35294574-35299573 Medicago truncatula
Medtr1g079470 10.0kb upstream 10.0kb upstream 13509 true chr1: 35299574-35313082 Medicago truncatula
Medtr1g079470 10.0kb upstream 10.0kb upstream 10000 false chr1: 35303083-35313082 Medicago truncatula
Medtr1g079470 10.0kb downstream 10.0kb downstream 13509 true chr1: 35289574-35303082 Medicago truncatula
Medtr1g079470 10.0kb downstream 10.0kb downstream 10000 false chr1: 35289574-35299573 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302931 5265 Fabidae View MSA
124063423 5270 Rosid View MSA
123740826 5271 Pentapetalae View MSA
122788385 5272 Eudicot View MSA
122044714 5273 Angiosperm View MSA
121344837 5274 Embryophyte View MSA
123380110 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.174       High
cufflinks 0.629        
cufflinks 0.931        
cufflinks 0.109       Low
cufflinks 1.371        
cufflinks 0.122     Low Low
cufflinks 0.48        
cufflinks 0.776        
cufflinks 0.271        

0 Strain