Gene : Medtr1g106910 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR31490:SF18 - 1,4-BETA-XYLAN ENDOHYDROLASE-RELATED Description:  glycosyl hydrolase family 10 protein
Genomic Order:  6034 Name:  ? Medtr1g106910
Secondary Identifier:  ? PAC:31094348
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g106910 0.5kb upstream 0.5kb upstream 3640 true chr1: 48061499-48065138 Medicago truncatula
Medtr1g106910 0.5kb upstream 0.5kb upstream 500 false chr1: 48064639-48065138 Medicago truncatula
Medtr1g106910 0.5kb downstream 0.5kb downstream 3640 true chr1: 48060999-48064638 Medicago truncatula
Medtr1g106910 0.5kb downstream 0.5kb downstream 500 false chr1: 48060999-48061498 Medicago truncatula
Medtr1g106910 1.0kb upstream 1.0kb upstream 4140 true chr1: 48061499-48065638 Medicago truncatula
Medtr1g106910 1.0kb upstream 1.0kb upstream 1000 false chr1: 48064639-48065638 Medicago truncatula
Medtr1g106910 1.0kb downstream 1.0kb downstream 4140 true chr1: 48060499-48064638 Medicago truncatula
Medtr1g106910 1.0kb downstream 1.0kb downstream 1000 false chr1: 48060499-48061498 Medicago truncatula
Medtr1g106910 2.0kb upstream 2.0kb upstream 5140 true chr1: 48061499-48066638 Medicago truncatula
Medtr1g106910 2.0kb upstream 2.0kb upstream 2000 false chr1: 48064639-48066638 Medicago truncatula
Medtr1g106910 2.0kb downstream 2.0kb downstream 5140 true chr1: 48059499-48064638 Medicago truncatula
Medtr1g106910 2.0kb downstream 2.0kb downstream 2000 false chr1: 48059499-48061498 Medicago truncatula
Medtr1g106910 5.0kb upstream 5.0kb upstream 8140 true chr1: 48061499-48069638 Medicago truncatula
Medtr1g106910 5.0kb upstream 5.0kb upstream 5000 false chr1: 48064639-48069638 Medicago truncatula
Medtr1g106910 5.0kb downstream 5.0kb downstream 8140 true chr1: 48056499-48064638 Medicago truncatula
Medtr1g106910 5.0kb downstream 5.0kb downstream 5000 false chr1: 48056499-48061498 Medicago truncatula
Medtr1g106910 10.0kb upstream 10.0kb upstream 13140 true chr1: 48061499-48074638 Medicago truncatula
Medtr1g106910 10.0kb upstream 10.0kb upstream 10000 false chr1: 48064639-48074638 Medicago truncatula
Medtr1g106910 10.0kb downstream 10.0kb downstream 13140 true chr1: 48051499-48064638 Medicago truncatula
Medtr1g106910 10.0kb downstream 10.0kb downstream 10000 false chr1: 48051499-48061498 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311948 5265 Fabidae View MSA
124074050 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.129       High
cufflinks 0.605        
cufflinks 0.036     Low Low
cufflinks 0.835        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.206        
cufflinks 1.43        
cufflinks 0.189        

0 Strain