Gene : Medtr1g108610 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Description:  repressor of RNA polymerase III transcription MAF1 protein
Genomic Order:  6177 Name:  ? Medtr1g108610
Secondary Identifier:  ? PAC:31100591
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g108610 0.5kb upstream 0.5kb upstream 6257 true chr1: 49077831-49084087 Medicago truncatula
Medtr1g108610 0.5kb upstream 0.5kb upstream 500 false chr1: 49077831-49078330 Medicago truncatula
Medtr1g108610 0.5kb downstream 0.5kb downstream 6257 true chr1: 49078331-49084587 Medicago truncatula
Medtr1g108610 0.5kb downstream 0.5kb downstream 500 false chr1: 49084088-49084587 Medicago truncatula
Medtr1g108610 1.0kb upstream 1.0kb upstream 6757 true chr1: 49077331-49084087 Medicago truncatula
Medtr1g108610 1.0kb upstream 1.0kb upstream 1000 false chr1: 49077331-49078330 Medicago truncatula
Medtr1g108610 1.0kb downstream 1.0kb downstream 6757 true chr1: 49078331-49085087 Medicago truncatula
Medtr1g108610 1.0kb downstream 1.0kb downstream 1000 false chr1: 49084088-49085087 Medicago truncatula
Medtr1g108610 2.0kb upstream 2.0kb upstream 7757 true chr1: 49076331-49084087 Medicago truncatula
Medtr1g108610 2.0kb upstream 2.0kb upstream 2000 false chr1: 49076331-49078330 Medicago truncatula
Medtr1g108610 2.0kb downstream 2.0kb downstream 7757 true chr1: 49078331-49086087 Medicago truncatula
Medtr1g108610 2.0kb downstream 2.0kb downstream 2000 false chr1: 49084088-49086087 Medicago truncatula
Medtr1g108610 5.0kb upstream 5.0kb upstream 10757 true chr1: 49073331-49084087 Medicago truncatula
Medtr1g108610 5.0kb upstream 5.0kb upstream 5000 false chr1: 49073331-49078330 Medicago truncatula
Medtr1g108610 5.0kb downstream 5.0kb downstream 10757 true chr1: 49078331-49089087 Medicago truncatula
Medtr1g108610 5.0kb downstream 5.0kb downstream 5000 false chr1: 49084088-49089087 Medicago truncatula
Medtr1g108610 10.0kb upstream 10.0kb upstream 15757 true chr1: 49068331-49084087 Medicago truncatula
Medtr1g108610 10.0kb upstream 10.0kb upstream 10000 false chr1: 49068331-49078330 Medicago truncatula
Medtr1g108610 10.0kb downstream 10.0kb downstream 15757 true chr1: 49078331-49094087 Medicago truncatula
Medtr1g108610 10.0kb downstream 10.0kb downstream 10000 false chr1: 49084088-49094087 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308593 5265 Fabidae View MSA
124066988 5270 Rosid View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.0       High
cufflinks 1.677        
cufflinks 3.978       High
cufflinks 2.578        
cufflinks 1.42        
cufflinks 1.86        
cufflinks 1.583        
cufflinks 2.299        
cufflinks 1.284       Low

0 Strain