Gene : Medtr1g107575 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12072:SF5 - CWF19-LIKE PROTEIN 2 Description:  CwfJ carboxy-terminal 1-like protein
Genomic Order:  6152 Name:  ? Medtr1g107575
Secondary Identifier:  ? PAC:31100673
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g107575 0.5kb upstream 0.5kb upstream 10040 true chr1: 48899441-48909480 Medicago truncatula
Medtr1g107575 0.5kb upstream 0.5kb upstream 500 false chr1: 48899441-48899940 Medicago truncatula
Medtr1g107575 0.5kb downstream 0.5kb downstream 10040 true chr1: 48899941-48909980 Medicago truncatula
Medtr1g107575 0.5kb downstream 0.5kb downstream 500 false chr1: 48909481-48909980 Medicago truncatula
Medtr1g107575 1.0kb upstream 1.0kb upstream 10540 true chr1: 48898941-48909480 Medicago truncatula
Medtr1g107575 1.0kb upstream 1.0kb upstream 1000 false chr1: 48898941-48899940 Medicago truncatula
Medtr1g107575 1.0kb downstream 1.0kb downstream 10540 true chr1: 48899941-48910480 Medicago truncatula
Medtr1g107575 1.0kb downstream 1.0kb downstream 1000 false chr1: 48909481-48910480 Medicago truncatula
Medtr1g107575 2.0kb upstream 2.0kb upstream 11540 true chr1: 48897941-48909480 Medicago truncatula
Medtr1g107575 2.0kb upstream 2.0kb upstream 2000 false chr1: 48897941-48899940 Medicago truncatula
Medtr1g107575 2.0kb downstream 2.0kb downstream 11540 true chr1: 48899941-48911480 Medicago truncatula
Medtr1g107575 2.0kb downstream 2.0kb downstream 2000 false chr1: 48909481-48911480 Medicago truncatula
Medtr1g107575 5.0kb upstream 5.0kb upstream 14540 true chr1: 48894941-48909480 Medicago truncatula
Medtr1g107575 5.0kb upstream 5.0kb upstream 5000 false chr1: 48894941-48899940 Medicago truncatula
Medtr1g107575 5.0kb downstream 5.0kb downstream 14540 true chr1: 48899941-48914480 Medicago truncatula
Medtr1g107575 5.0kb downstream 5.0kb downstream 5000 false chr1: 48909481-48914480 Medicago truncatula
Medtr1g107575 10.0kb upstream 10.0kb upstream 19540 true chr1: 48889941-48909480 Medicago truncatula
Medtr1g107575 10.0kb upstream 10.0kb upstream 10000 false chr1: 48889941-48899940 Medicago truncatula
Medtr1g107575 10.0kb downstream 10.0kb downstream 19540 true chr1: 48899941-48919480 Medicago truncatula
Medtr1g107575 10.0kb downstream 10.0kb downstream 10000 false chr1: 48909481-48919480 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306045 5265 Fabidae View MSA
124063032 5270 Rosid View MSA
123740885 5271 Pentapetalae View MSA
122786824 5272 Eudicot View MSA
122046220 5273 Angiosperm View MSA
121347748 5274 Embryophyte View MSA
123426181 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.376       High
cufflinks 4.729        
cufflinks 4.775        
cufflinks 0.963       Low
cufflinks 4.104        
cufflinks 1.572       Low
cufflinks 3.284        
cufflinks 4.099        
cufflinks 2.048        

0 Strain