Gene : Medtr1g109590 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31285:SF0 - PROMOTER OF FILAMENTATION PROTEIN 1 Description:  nucleotidyltransferase
Genomic Order:  6241 Name:  ? Medtr1g109590
Secondary Identifier:  ? PAC:31092884
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g109590 0.5kb upstream 0.5kb upstream 7707 true chr1: 49559673-49567379 Medicago truncatula
Medtr1g109590 0.5kb upstream 0.5kb upstream 500 false chr1: 49559673-49560172 Medicago truncatula
Medtr1g109590 0.5kb downstream 0.5kb downstream 7707 true chr1: 49560173-49567879 Medicago truncatula
Medtr1g109590 0.5kb downstream 0.5kb downstream 500 false chr1: 49567380-49567879 Medicago truncatula
Medtr1g109590 1.0kb upstream 1.0kb upstream 8207 true chr1: 49559173-49567379 Medicago truncatula
Medtr1g109590 1.0kb upstream 1.0kb upstream 1000 false chr1: 49559173-49560172 Medicago truncatula
Medtr1g109590 1.0kb downstream 1.0kb downstream 8207 true chr1: 49560173-49568379 Medicago truncatula
Medtr1g109590 1.0kb downstream 1.0kb downstream 1000 false chr1: 49567380-49568379 Medicago truncatula
Medtr1g109590 2.0kb upstream 2.0kb upstream 9207 true chr1: 49558173-49567379 Medicago truncatula
Medtr1g109590 2.0kb upstream 2.0kb upstream 2000 false chr1: 49558173-49560172 Medicago truncatula
Medtr1g109590 2.0kb downstream 2.0kb downstream 9207 true chr1: 49560173-49569379 Medicago truncatula
Medtr1g109590 2.0kb downstream 2.0kb downstream 2000 false chr1: 49567380-49569379 Medicago truncatula
Medtr1g109590 5.0kb upstream 5.0kb upstream 12207 true chr1: 49555173-49567379 Medicago truncatula
Medtr1g109590 5.0kb upstream 5.0kb upstream 5000 false chr1: 49555173-49560172 Medicago truncatula
Medtr1g109590 5.0kb downstream 5.0kb downstream 12207 true chr1: 49560173-49572379 Medicago truncatula
Medtr1g109590 5.0kb downstream 5.0kb downstream 5000 false chr1: 49567380-49572379 Medicago truncatula
Medtr1g109590 10.0kb upstream 10.0kb upstream 17207 true chr1: 49550173-49567379 Medicago truncatula
Medtr1g109590 10.0kb upstream 10.0kb upstream 10000 false chr1: 49550173-49560172 Medicago truncatula
Medtr1g109590 10.0kb downstream 10.0kb downstream 17207 true chr1: 49560173-49577379 Medicago truncatula
Medtr1g109590 10.0kb downstream 10.0kb downstream 10000 false chr1: 49567380-49577379 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301977 5265 Fabidae View MSA
124066208 5270 Rosid View MSA
123737916 5271 Pentapetalae View MSA
122789184 5272 Eudicot View MSA
122047029 5273 Angiosperm View MSA
121345024 5274 Embryophyte View MSA
123425109 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.222        
cufflinks 0.482       High
cufflinks 0.478        
cufflinks 0.174        
cufflinks 0.547       High
cufflinks 0.114     Low Low
cufflinks 0.243        
cufflinks 0.37        
cufflinks 0.214        

0 Strain