Gene : Medtr1g109620 M. truncatula Mt4.0v1
Defline:  (1 of 6) 2.4.1.15//3.1.3.12 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) / UDP-glucose--glucose-phosphate glucosyltransferase // Trehalose-phosphatase / Trehalose 6-phosphate phosphatase Description:  trehalose-6-phosphate synthase domain protein
Genomic Order:  6243 Name:  ? Medtr1g109620
Secondary Identifier:  ? PAC:31097188
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g109620 0.5kb upstream 0.5kb upstream 4772 true chr1: 49581049-49585820 Medicago truncatula
Medtr1g109620 0.5kb upstream 0.5kb upstream 500 false chr1: 49585321-49585820 Medicago truncatula
Medtr1g109620 0.5kb downstream 0.5kb downstream 4772 true chr1: 49580549-49585320 Medicago truncatula
Medtr1g109620 0.5kb downstream 0.5kb downstream 500 false chr1: 49580549-49581048 Medicago truncatula
Medtr1g109620 1.0kb upstream 1.0kb upstream 5272 true chr1: 49581049-49586320 Medicago truncatula
Medtr1g109620 1.0kb upstream 1.0kb upstream 1000 false chr1: 49585321-49586320 Medicago truncatula
Medtr1g109620 1.0kb downstream 1.0kb downstream 5272 true chr1: 49580049-49585320 Medicago truncatula
Medtr1g109620 1.0kb downstream 1.0kb downstream 1000 false chr1: 49580049-49581048 Medicago truncatula
Medtr1g109620 2.0kb upstream 2.0kb upstream 6272 true chr1: 49581049-49587320 Medicago truncatula
Medtr1g109620 2.0kb upstream 2.0kb upstream 2000 false chr1: 49585321-49587320 Medicago truncatula
Medtr1g109620 2.0kb downstream 2.0kb downstream 6272 true chr1: 49579049-49585320 Medicago truncatula
Medtr1g109620 2.0kb downstream 2.0kb downstream 2000 false chr1: 49579049-49581048 Medicago truncatula
Medtr1g109620 5.0kb upstream 5.0kb upstream 9272 true chr1: 49581049-49590320 Medicago truncatula
Medtr1g109620 5.0kb upstream 5.0kb upstream 5000 false chr1: 49585321-49590320 Medicago truncatula
Medtr1g109620 5.0kb downstream 5.0kb downstream 9272 true chr1: 49576049-49585320 Medicago truncatula
Medtr1g109620 5.0kb downstream 5.0kb downstream 5000 false chr1: 49576049-49581048 Medicago truncatula
Medtr1g109620 10.0kb upstream 10.0kb upstream 14272 true chr1: 49581049-49595320 Medicago truncatula
Medtr1g109620 10.0kb upstream 10.0kb upstream 10000 false chr1: 49585321-49595320 Medicago truncatula
Medtr1g109620 10.0kb downstream 10.0kb downstream 14272 true chr1: 49571049-49585320 Medicago truncatula
Medtr1g109620 10.0kb downstream 10.0kb downstream 10000 false chr1: 49571049-49581048 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305735 5265 Fabidae View MSA
124065335 5270 Rosid View MSA
123751102 5271 Pentapetalae View MSA
122786361 5272 Eudicot View MSA
122049755 5273 Angiosperm View MSA
121348711 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.177       High
cufflinks 0.53        
cufflinks 0.454        
cufflinks 0.3        
cufflinks 1.275        
cufflinks 0.088     Low Low
cufflinks 1.071        
cufflinks 0.418        
cufflinks 1.831        

0 Strain