Gene : Medtr1g110590 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11088:SF27 - ADENYLATE ISOPENTENYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Description:  adenylate isopentenyltransferase
Genomic Order:  6290 Name:  ? Medtr1g110590
Secondary Identifier:  ? PAC:31100720
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-2681 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g110590 0.5kb upstream 0.5kb upstream 1775 true chr1: 49909216-49910990 Medicago truncatula
Medtr1g110590 0.5kb upstream 0.5kb upstream 500 false chr1: 49910491-49910990 Medicago truncatula
Medtr1g110590 0.5kb downstream 0.5kb downstream 1775 true chr1: 49908716-49910490 Medicago truncatula
Medtr1g110590 0.5kb downstream 0.5kb downstream 500 false chr1: 49908716-49909215 Medicago truncatula
Medtr1g110590 1.0kb upstream 1.0kb upstream 2275 true chr1: 49909216-49911490 Medicago truncatula
Medtr1g110590 1.0kb upstream 1.0kb upstream 1000 false chr1: 49910491-49911490 Medicago truncatula
Medtr1g110590 1.0kb downstream 1.0kb downstream 2275 true chr1: 49908216-49910490 Medicago truncatula
Medtr1g110590 1.0kb downstream 1.0kb downstream 1000 false chr1: 49908216-49909215 Medicago truncatula
Medtr1g110590 2.0kb upstream 2.0kb upstream 3275 true chr1: 49909216-49912490 Medicago truncatula
Medtr1g110590 2.0kb upstream 2.0kb upstream 2000 false chr1: 49910491-49912490 Medicago truncatula
Medtr1g110590 2.0kb downstream 2.0kb downstream 3275 true chr1: 49907216-49910490 Medicago truncatula
Medtr1g110590 2.0kb downstream 2.0kb downstream 2000 false chr1: 49907216-49909215 Medicago truncatula
Medtr1g110590 5.0kb upstream 5.0kb upstream 6275 true chr1: 49909216-49915490 Medicago truncatula
Medtr1g110590 5.0kb upstream 5.0kb upstream 5000 false chr1: 49910491-49915490 Medicago truncatula
Medtr1g110590 5.0kb downstream 5.0kb downstream 6275 true chr1: 49904216-49910490 Medicago truncatula
Medtr1g110590 5.0kb downstream 5.0kb downstream 5000 false chr1: 49904216-49909215 Medicago truncatula
Medtr1g110590 10.0kb upstream 10.0kb upstream 11275 true chr1: 49909216-49920490 Medicago truncatula
Medtr1g110590 10.0kb upstream 10.0kb upstream 10000 false chr1: 49910491-49920490 Medicago truncatula
Medtr1g110590 10.0kb downstream 10.0kb downstream 11275 true chr1: 49899216-49910490 Medicago truncatula
Medtr1g110590 10.0kb downstream 10.0kb downstream 10000 false chr1: 49899216-49909215 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300556 5265 Fabidae View MSA
124061925 5270 Rosid View MSA
123742682 5271 Pentapetalae View MSA
122792550 5272 Eudicot View MSA
122046326 5273 Angiosperm View MSA
121310589 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.112        
cufflinks 0.024     Low  
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.951       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.052     Low  

0 Strain