Gene : Medtr1g101400 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.17.1.8 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase Description:  dihydrodipicolinate reductase
Genomic Order:  5695 Name:  ? Medtr1g101400
Secondary Identifier:  ? PAC:31094288
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5097 Medicago truncatula pathologic  
Mtruncatula PWY-724 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g101400 0.5kb upstream 0.5kb upstream 2958 true chr1: 45802199-45805156 Medicago truncatula
Medtr1g101400 0.5kb upstream 0.5kb upstream 500 false chr1: 45804657-45805156 Medicago truncatula
Medtr1g101400 0.5kb downstream 0.5kb downstream 2958 true chr1: 45801699-45804656 Medicago truncatula
Medtr1g101400 0.5kb downstream 0.5kb downstream 500 false chr1: 45801699-45802198 Medicago truncatula
Medtr1g101400 1.0kb upstream 1.0kb upstream 3458 true chr1: 45802199-45805656 Medicago truncatula
Medtr1g101400 1.0kb upstream 1.0kb upstream 1000 false chr1: 45804657-45805656 Medicago truncatula
Medtr1g101400 1.0kb downstream 1.0kb downstream 3458 true chr1: 45801199-45804656 Medicago truncatula
Medtr1g101400 1.0kb downstream 1.0kb downstream 1000 false chr1: 45801199-45802198 Medicago truncatula
Medtr1g101400 2.0kb upstream 2.0kb upstream 4458 true chr1: 45802199-45806656 Medicago truncatula
Medtr1g101400 2.0kb upstream 2.0kb upstream 2000 false chr1: 45804657-45806656 Medicago truncatula
Medtr1g101400 2.0kb downstream 2.0kb downstream 4458 true chr1: 45800199-45804656 Medicago truncatula
Medtr1g101400 2.0kb downstream 2.0kb downstream 2000 false chr1: 45800199-45802198 Medicago truncatula
Medtr1g101400 5.0kb upstream 5.0kb upstream 7458 true chr1: 45802199-45809656 Medicago truncatula
Medtr1g101400 5.0kb upstream 5.0kb upstream 5000 false chr1: 45804657-45809656 Medicago truncatula
Medtr1g101400 5.0kb downstream 5.0kb downstream 7458 true chr1: 45797199-45804656 Medicago truncatula
Medtr1g101400 5.0kb downstream 5.0kb downstream 5000 false chr1: 45797199-45802198 Medicago truncatula
Medtr1g101400 10.0kb upstream 10.0kb upstream 12458 true chr1: 45802199-45814656 Medicago truncatula
Medtr1g101400 10.0kb upstream 10.0kb upstream 10000 false chr1: 45804657-45814656 Medicago truncatula
Medtr1g101400 10.0kb downstream 10.0kb downstream 12458 true chr1: 45792199-45804656 Medicago truncatula
Medtr1g101400 10.0kb downstream 10.0kb downstream 10000 false chr1: 45792199-45802198 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302709 5265 Fabidae View MSA
124065069 5270 Rosid View MSA
123739710 5271 Pentapetalae View MSA
122786759 5272 Eudicot View MSA
122042958 5273 Angiosperm View MSA
121344567 5274 Embryophyte View MSA
123380066 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.143     High  
cufflinks 9.841       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.505     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.055     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain